Research output per year
Research output per year
Personal profile
Research interests
Scientists are often tasked with identifying signals from a dataset. Correctly identifying such signals is a complicated task, as noise in the data may pose as signals due to natural error.
I am interested in the development of multiple testing procedures for detecting these signals and their applications to variable selection and the applied sciences.
If you are a student and wish to learn more about my area of research, please drop me an email and we can discuss :)
Teaching
- STAT8310 Statistical Theory (Macquarie University, 2025 Semester 2)
- STAT2371 Statistics (Macquarie University, 2025 Semester 2)
- STAT1371 Statistical Data Analysis (Macquarie University, 2025 Semester 1)
- MATH1062 Mathematics 1B (University of Sydney, 2024 Semester 2) with official teaching commendation
Research engagement
I am the current organiser for Statistics Discipline Seminar Series at the School of Mathematical and Physical Sciences. If you are an academic, please drop me an email if you are interested in giving a talk.
Education/Academic qualification
Statistics, PhD, Data-driven multiple testing using side information with a focus on peptide detection, The University of Sydney
Award Date: 5 Mar 2025
External positions
Research Associate in Statistical Modelling, University of Sydney
Nov 2024 → Jan 2025
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Assessment of false discovery rate control in tandem mass spectrometry analysis using entrapment
Wen, B., Freestone, J., Riffle, M., MacCoss, M. J., Noble, W. S. & Keich, U., 21 Jan 2025, (Submitted) Cold Spring Harbor Laboratory (CSHL), 21 p. (bioRxiv).Research output: Working paper › Preprint
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Assessment of false discovery rate control in tandem mass spectrometry analysis using entrapment
Wen, B., Freestone, J., Riffle, M., MacCoss, M. J., Noble, W. S. & Keich, U., Jul 2025, In: Nature Methods. 22, 7, p. 1454-1463 14 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile33 Link opens in a new tab Citations (Scopus)189 Downloads (Pure) -
How to train a postprocessor for tandem mass spectrometry proteomics database search while maintaining control of the false discovery rate
Freestone, J., Käll, L., Noble, W. S. & Keich, U., 2 May 2025, In: Journal of Proteome Research. 24, 5, p. 2266-2279 14 p.Research output: Contribution to journal › Article › peer-review
4 Link opens in a new tab Citations (Scopus) -
Analysis of tandem mass spectrometry data with CONGA: combining open and narrow searches with group-wise analysis
Freestone, J., Noble, W. S. & Keich, U., 7 Jun 2024, In: Journal of Proteome Research. 23, 6, p. 1894-1906 13 p.Research output: Contribution to journal › Article › peer-review
3 Link opens in a new tab Citations (Scopus) -
Reinvestigating the correctness of decoy-based false discovery rate control in proteomics tandem mass spectrometry
Freestone, J., Noble, W. S. & Keich, U., 7 Jun 2024, In: Journal of Proteome Research. 23, 6, p. 1907-1914 8 p.Research output: Contribution to journal › Article › peer-review
7 Link opens in a new tab Citations (Scopus)
Prizes
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Postgraduate Research Prize for Outstanding Academic Achievement
Freestone, J. (Recipient), 2024
Prize
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