• 6682 Citations
  • 45 h-Index
1987 …2020

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Article
2020

A synthesis of bacterial and archaeal phenotypic trait data

Madin, J. S., Nielsen, D. A., Brbic, M., Corkrey, R., Danko, D., Edwards, K., Engqvist, M. K. M., Fierer, N., Geoghegan, J. L., Gillings, M., Kyrpides, N. C., Litchman, E., Mason, C. E., Moore, L., Nielsen, S. L., Paulsen, I. T., Price, N. D., Reddy, T. B. K., Richards, M. A., Rocha, E. P. C. & 9 others, Schmidt, T. M., Shaaban, H., Shukla, M., Supek, F., Tetu, S. G., Vieira-Silva, S., Wattam, A. R., Westfall, D. A. & Westoby, M., 5 Jun 2020, In : Scientific Data. 7, p. 170 8 p., 170.

Research output: Contribution to journalArticle

Open Access
File
1 Downloads (Pure)

Conserving the holobiont

Carthey, A. J. R., Blumstein, D. T., Gallagher, R. V., Tetu, S. G. & Gillings, M. R., Apr 2020, In : Functional Ecology. 34, 4, p. 764-776 13 p.

Research output: Contribution to journalArticle

Open Access

Dynamics of class 1 integrons in aerobic biofilm reactors spiked with antibiotics

Huyan, J., Tian, Z., Zhang, Y., Zhang, H., Shi, Y., Gillings, M. R. & Yang, M., Jul 2020, In : Environment International. 140, 9 p., 105816.

Research output: Contribution to journalArticle

Open Access
File

Novel Transposon Tn6433 variants accelerate the dissemination of tet(E) in Aeromonas in an aerobic biofilm reactor under oxytetracycline stresses

Shi, Y., Tian, Z., Gillings, M. R., Zhang, Y., Zhang, H., Huyan, J. & Yang, M., 2 Jun 2020, In : Environmental Science and Technology. 54, 11, p. 6781-6791 11 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Phylogeny and form in fishes: genetic and morphometric characteristics of dragonets (Foetorepus sp.) do not align

Myun Park, J., Powell, N. N., Gillings, M. R., Gaston, T. F. & Williamson, J. E., Apr 2020, In : Acta Zoologica. 101, 2, p. 218-226 9 p.

Research output: Contribution to journalArticle

2019
3 Citations (Scopus)
Open Access
File
19 Downloads (Pure)

Characterization of 12 polymorphic microsatellite loci in the Port Jackson Shark, Heterodontus portusjacksoni (Meyer, 1793)

Clark, J. A., Brown, C., Gillings, M. R., Gardner, M., Williamson, J. E., Izzo, C. & Day, J., Feb 2019, In : Marine Biodiversity. 49, 1, p. 505–508 4 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Fungus-initiated catalytic reactions at hyphal-mineral interfaces drive iron redox cycling and biomineralization

Yu, G. H., Chi, Z. L., Teng, H. H., Dong, H. L., Kappler, A., Gillings, M. R., Polizzotto, M. L., Liu, C. Q. & Zhu, Y. G., 1 Sep 2019, In : Geochimica et Cosmochimica Acta. 260, p. 192-203 12 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)
1 Citation (Scopus)
2 Citations (Scopus)
2 Citations (Scopus)

Rapid microevolution of biofilm cells in response to antibiotics

Penesyan, A., Nagy, S. S., Kjelleberg, S., Gillings, M. R. & Paulsen, I. T., 6 Nov 2019, In : npj Biofilms and Microbiomes. 5, p. 1-14 14 p., 34.

Research output: Contribution to journalArticle

Open Access
File
3 Citations (Scopus)
5 Downloads (Pure)
Open Access
File
1 Citation (Scopus)
15 Downloads (Pure)
2018

Conserved phylogenetic distribution and limited antibiotic resistance of class 1 integrons revealed by assessing the bacterial genome and plasmid collection

Zhang, A. N., Li, L-G., Ma, L., Gillings, M. R., Tiedje, J. M. & Zhang, T., 21 Jul 2018, In : Microbiome. 6, 1, p. 1-14 14 p., 130.

Research output: Contribution to journalArticle

Open Access
File
12 Citations (Scopus)
25 Downloads (Pure)

DNA as a pollutant: the clinical class 1 integron

Gillings, M. R., Mar 2018, In : Current Pollution Reports. 4, 1, p. 49-55 7 p.

Research output: Contribution to journalArticle

17 Citations (Scopus)

Environmental dimensions of antibiotic resistance: assessment of basic science gaps

Smalla, K., Cook, K., Djordjevic, S. P., Klümper, U. & Gillings, M., 1 Dec 2018, In : FEMS Microbiology Ecology. 94, 12, p. 1-6 6 p., fiy195.

Research output: Contribution to journalArticle

Open Access
12 Citations (Scopus)

Impact of wastewater treatment on the prevalence of integrons and the genetic diversity of integron gene cassettes

An, X. L., Chen, Q-L., Zhu, D., Zhu, Y. G., Gillings, M. R. & Su, J. Q., May 2018, In : Applied and Environmental Microbiology. 84, 9, p. 1-15 15 p., e02766-17.

Research output: Contribution to journalArticle

20 Citations (Scopus)

Mobile DNAs as ecologically and evolutionarily independent units of life

Ghaly, T. M. & Gillings, M. R., Nov 2018, In : Trends in Microbiology. 26, 11, p. 904-912 9 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Pollutants that replicate: xenogenetic DNAs

Gillings, M. R., Westoby, M. & Ghaly, T. M., Dec 2018, In : Trends in Microbiology. 26, 12, p. 975-977 3 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Prevalence and transmission of antibiotic resistance and microbiota between humans and water environments

Zhou, Z-C., Feng, W-Q., Han, Y., Zheng, J., Chen, T., Wei, Y-Y., Gillings, M., Zhu, Y-G. & Chen, H., Dec 2018, In : Environment International. 121, Pt 2, p. 1155-1161 7 p.

Research output: Contribution to journalArticle

Open Access
File
20 Citations (Scopus)
1 Downloads (Pure)

Rhizosphere microorganisms can influence the timing of plant flowering

Lu, T., Ke, M., Lavoie, M., Jin, Y., Fan, X., Zhang, Z., Fu, Z., Sun, L., Gillings, M., Peñuelas, J., Qian, H. & Zhu, Y. G., 26 Dec 2018, In : Microbiome. 6, 1, p. 1-12 12 p., 231.

Research output: Contribution to journalArticle

Open Access
File
29 Citations (Scopus)
13 Downloads (Pure)

Tracking antibiotic resistome during wastewater treatment using high throughput quantitative PCR

An, X. L., Su, J. Q., Li, B., Ouyang, W. Y., Zhao, Y., Chen, Q-L., Cui, L., Chen, H., Gillings, M. R., Zhang, T. & Zhu, Y. G., Aug 2018, In : Environment International. 117, p. 146-153 8 p.

Research output: Contribution to journalArticle

41 Citations (Scopus)
2017

Application of struvite alters the antibiotic resistome in soil, rhizosphere, and phyllosphere

Chen, Q. L., An, X. L., Zhu, Y. G., Su, J. Q., Gillings, M. R., Ye, Z. L. & Cui, L., 18 Jul 2017, In : Environmental Science and Technology. 51, 14, p. 8149-8157 9 p.

Research output: Contribution to journalArticle

65 Citations (Scopus)

Chemical, biological, and DNA markers for tracing slaughterhouse effluent

Harvey, P. J., Taylor, M. P., Handley, H. K., Foster, S., Gillings, M. R. & Asher, A. J., Jul 2017, In : Environmental Research. 156, p. 534-541 8 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Continental-scale pollution of estuaries with antibiotic resistance genes

Zhu, Y-G., Zhao, Y., Li, B., Huang, C-L., Zhang, S-Y., Yu, S., Chen, Y-S., Zhang, T., Gillings, M. R. & Su, J-Q., 30 Jan 2017, In : Nature Microbiology. 2, p. 16270-1-16270-7 7 p., 16270.

Research output: Contribution to journalArticle

275 Citations (Scopus)

Discovery of the fourth mobile sulfonamide resistance gene

Razavi, M., Marathe, N. P., Gillings, M. R., Flach, C-F., Kristiansson, E. & Larsson, D. G. J., 15 Dec 2017, In : Microbiome. 5, p. 1-12 12 p., 160.

Research output: Contribution to journalArticle

Open Access
File
33 Citations (Scopus)
7 Downloads (Pure)

Evolution of class 1 integrons: Mobilization and dispersal via food-borne bacteria

Ghaly, T. M., Chow, L., Asher, A. J., Waldron, L. S. & Gillings, M. R., 6 Jun 2017, In : PLoS ONE. 12, 6, p. 1-11 11 p., e0179169.

Research output: Contribution to journalArticle

Open Access
File
22 Citations (Scopus)
11 Downloads (Pure)

Genomics and the evolution of antibiotic resistance

Gillings, M. R., Paulsen, I. T. & Tetu, S. G., 1 Jan 2017, In : Annals of the New York Academy of Sciences. 1388, 1, p. 92-107 16 p.

Research output: Contribution to journalArticle

19 Citations (Scopus)

Metagenomics of urban sewage identifies an extensively shared antibiotic resistome in China

Su, J. Q., An, X. L., Li, B., Chen, Q. L., Gillings, M. R., Chen, H., Zhang, T. & Zhu, Y. G., 19 Jul 2017, In : Microbiome. 5, p. 1-15 15 p., 84.

Research output: Contribution to journalArticle

Open Access
File
72 Citations (Scopus)
2 Downloads (Pure)

Microbial mass movements

Zhu, Y. G., Gillings, M., Simonet, P., Stekel, D., Banwart, S. & Penuelas, J., 15 Sep 2017, In : Science. 357, 6356, p. 1099-1100 2 p.

Research output: Contribution to journalArticle

95 Citations (Scopus)
2016

Escherichia coli out in the cold: dissemination of human-derived bacteria into the Antarctic microbiome

Power, M. L., Samuel, A., Smith, J. J., Stark, J. S., Gillings, M. R. & Gordon, D. M., 1 Aug 2016, In : Environmental Pollution. 215, p. 58-65 8 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)
2015

Bad times for good bacteria: how modern life has damaged our internal ecosystems

Gillings, M., 9 Oct 2015, The Conversation.

Research output: Contribution to Newspaper/Magazine/WebsiteArticle

How antibiotic pollution of waterways creates superbugs

Gillings, M., 12 Mar 2015, The Conversation.

Research output: Contribution to Newspaper/Magazine/WebsiteArticle

Potential impacts of aquatic pollutants: sub-clinical antibiotic concentrations induce genome changes and promote antibiotic resistance

Chow, L., Waldron, L. & Gillings, M. R., 5 Aug 2015, In : Frontiers in Microbiology. 6, p. 803-1-803-10 10 p., 803.

Research output: Contribution to journalArticle

Open Access
File
30 Citations (Scopus)
7 Downloads (Pure)

Screening foodstuffs for class 1 integrons and gene cassettes

Waldron, L. S. & Gillings, M. R., 19 Jun 2015, In : Journal of Visualized Experiments. 100, p. 1-7 7 p., e52889.

Research output: Contribution to journalArticle

3 Citations (Scopus)

The unusual occurrence of green algal balls of Chaetomorpha linum on a beach in Sydney, Australia

Cooke, J., Lanfear, R., Downing, A., Gillings, M. R., Poore, A. G. B., Goodwin, I. D., Waldron, L. S., Phillips, A., Metti, Y. & Bulbert, M. W., 1 Oct 2015, In : Botanica Marina. 58, 5, p. 401-407 7 p.

Research output: Contribution to journalArticle

Open Access
File
2 Citations (Scopus)
337 Downloads (Pure)

Universities run as businesses can’t pursue genuine learning

Gillings, M. & Williamson, J., 19 Jun 2015, The Conversation.

Research output: Contribution to Newspaper/Magazine/WebsiteArticle

Using the class 1 integron-integrase gene as a proxy for anthropogenic pollution

Gillings, M. R., Gaze, W. H., Pruden, A., Smalla, K., Tiedje, J. M. & Zhu, Y. G., 23 Jun 2015, In : ISME Journal. 9, 6, p. 1269-1279 11 p.

Research output: Contribution to journalArticle

Open Access
File
384 Citations (Scopus)
13 Downloads (Pure)
2014

Fungal community structure in disease suppressive soils assessed by 28S LSU gene sequencing

Penton, C. R., Gupta, V. V. S. R., Tiedje, J. M., Neate, S. M., Ophel-Keller, K., Gillings, M., Harvey, P., Pham, A. & Roget, D. K., 3 Apr 2014, In : PLoS ONE. 9, 4, p. 1-12 12 p., e93893.

Research output: Contribution to journalArticle

Open Access
File
60 Citations (Scopus)
24 Downloads (Pure)

Genetic structure and diversity of two highly vulnerable carcharhinids in Australian waters

Geraghty, P. T., Williamson, J. E., Macbeth, W. G., Blower, D. C., Morgan, J. A. T., Johnson, G., Ovenden, J. R. & Gillings, M. R., 2014, In : Endangered Species Research. 24, 1, p. 45-60 16 p.

Research output: Contribution to journalArticle

Open Access
14 Citations (Scopus)

The cost of living in the Anthropocene

Gillings, M. & Hagan-Lawson, E. L., 2014, In : Earth perspectives. 1, 2, p. 1-11 11 p.

Research output: Contribution to journalArticle

Open Access
File
79 Downloads (Pure)

Were there evolutionary advantages to premenstrual syndrome?

Gillings, M. R., Sep 2014, In : Evolutionary Applications. 7, 8, p. 897-904 8 p.

Research output: Contribution to journalArticle

Open Access
File
11 Citations (Scopus)
61 Downloads (Pure)
2013

Changes in Prokaryote and Eukaryote Assemblages Along a Gradient of Hydrocarbon Contamination in Groundwater

Stephenson, S., Chariton, A. A., Holley, M. P., O'Sullivan, M., Gillings, M. R. & Hose, G. C., Aug 2013, In : Geomicrobiology Journal. 30, 7, p. 623-634 12 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)

Into the wild: dissemination of antibiotic resistance determinants via a species recovery program

Power, M. L., Emery, S. & Gillings, M. R., 22 May 2013, In : PLoS ONE. 8, 5, p. 1-5 5 p., e63017.

Research output: Contribution to journalArticle

Open Access
File
27 Citations (Scopus)
7 Downloads (Pure)

Life in the dark: Metagenomic evidence that a microbial slime community is driven by inorganic nitrogen metabolism

Tetu, S. G., Breakwell, K., Elbourne, L. D. H., Holmes, A. J., Gillings, M. R. & Paulsen, I. T., Jun 2013, In : ISME Journal. 7, 6, p. 1227-1236 10 p.

Research output: Contribution to journalArticle

29 Citations (Scopus)

Population expansion and genetic structure in Carcharhinus brevipinna in the Southern Indo-Pacific

Geraghty, P. T., Williamson, J. E., Macbeth, W. G., Wintner, S. P., Harry, A. V., Ovenden, J. R. & Gillings, M. R., 25 Sep 2013, In : PLoS ONE. 8, 9, p. 1-18 18 p., e75169.

Research output: Contribution to journalArticle

Open Access
File
16 Citations (Scopus)
10 Downloads (Pure)

The diatom genus Pseudo-nitzschia (Bacillariophyceae) in New South Wales, Australia: Morphotaxonomy, molecular phylogeny, toxicity, and distribution

Ajani, P., Murray, S., Hallegraeff, G., Lundholm, N., Gillings, M., Brett, S. & Armand, L., Aug 2013, In : Journal of Phycology. 49, 4, p. 765-785 21 p.

Research output: Contribution to journalArticle

22 Citations (Scopus)
2012

A dual coat protein construct establishes resistance to Passionfruit woodiness and Cucumber mosaic viruses

Sokhandan-Bashir, N., Gillings, M. & Bowyer, J. W., Sep 2012, In : Journal of Agricultural Science and Technology. 14, 5, p. 1105-1120 16 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Geochemical and microbial diversity of bundera sinkhole, an anchialine system in the eastern Indian Ocean

Humphreys, W., Tetu, S., Elbourne, L., Gillings, M., Seymour, J., Mitchell, J. & Paulsen, I., Sep 2012, In : Natura Croatica. 21, Suppl.1, p. 59-63 5 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)