Projects per year
Personal profile
Biography
Dr Patrick Buerger leads the Marine Omics and Technology Lab at Applied BioSciences, Macquarie University. He is a molecular and computational ecologist with a research focus on microbial genomics, biotechnology and bioinformatics.
Website: www.marineomicslab.com
Using omics technologies, genetic solutions, assisted evolution and comparative genomics, Dr Buerger and his team investigate how aquatic organisms adapt to new environments and harness this knowledge to influence their biology for specific outcomes and to address critical challenges.
Current projects include:
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Enhancing Thermal Tolerance in Microalgae: This project involves the identification of molecular mechanisms that underpin increased thermal tolerance. The team uses genome and transcriptome sequencing of microalgae that have undergone heat-evolution through assisted evolution.
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Coral Resilience to Climate Change: Investigating genetic adaptations in corals and their impact on thermal tolerance to better understand coral resilience to climate change.
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Genetic Engineering of Microalgae: Dr Buerger's team works on enhancing microalgae's thermal tolerance by implementing genetic engineering techniques targeting both the nucleus and chloroplast.
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Somatic Hybridisation of Microalgae: This project aims to develop novel phenotypic diversity and genotypes in microalgae through somatic hybridization. The process includes comprehensive physiological and genetic characterisations.
Patrick is also part of the team "Enhanced Corals and Treatments" from the Reef Restoration and Adaptation Program (RRAP). Previously, Patrick worked as a postdoctoral fellow with CSIRO's Synthetic Biology Future Science Platform and the University of Melbourne, and completed his PhD in Marine Science on "Viruses and coral diseases" at the Australian Institute of Marine Science and James Cook University in Townsville, Australia.
Research interests
If you like to join the team, please get in contact via email. We are currently seeking domestic and international HDR students with a background in bioinformatics, molecular biology, biotechnology and/or genetics.
We offer a strong collaborative and supportive environment with great facilities, infrastructure and network. Our team also emphasizes the development of cutting-edge crossover skills between bioinformatics, genetics, and ecology.
Education/Academic qualification
Marine Science, PhD, Viruses and Coral Diseases, Australian Inst Marine Sci, Australian Institute of Marine Science
Award Date: 30 Sept 2017
Marine Ecology, Master of Science, University of Bremen
2009 → 2011
General Biology, Bachelor of Science, University of Bochum
2006 → 2009
External positions
Postdoctoral Fellow - Coral genomics, CSIRO Land and Water
2017 → 2020
Visiting Scientist, The University of Melbourne
2017 → 2024
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Collaborations and top research areas from the last five years
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Chromosome-length 3D genomics for coral hybrids
Buerger, P., Jabeen, A., Nitschke, M., van Oppen, M. J. H. & Kaur, P.
1/10/23 → 30/09/25
Project: Research
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Increasing coral adaptation to heat stress through genetic engineering of their symbiotic microalgae
1/09/21 → 1/01/24
Project: Research
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Pushing the limits: expanding the temperature tolerance of a coral photosymbiont through differing selection regimes
Scharfenstein, H. J., Peplow, L. M., Alvarez-Roa, C., Nitschke, M. R., Chan, W. Y., Buerger, P. & van Oppen, M. JH., 12 Feb 2024, (Submitted) (bioRxiv).Research output: Working paper › Preprint
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Pushing the limits: expanding the temperature tolerance of a coral photosymbiont through differing selection regimes
Scharfenstein, H. J., Peplow, L. M., Alvarez-Roa, C., Nitschke, M. R., Chan, W. Y., Buerger, P. & van Oppen, M. J. H., Sept 2024, In: New Phytologist. 243, 6, p. 2130-2145 16 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile4 Downloads (Pure) -
The use of experimentally evolved coral photosymbionts for reef restoration
Nitschke, M., Abrego, D., Allen, C. E., Alvarez-Roa, C., Boulotte, N. M., Buerger, P., Chan, W. Y., Fae Neto, W., Ivory, E., Johnston, B., Meyers, L., Parra, C., Peplow, L. M., Perez, T., Scharfenstein, H. J. & van Oppen, M. J. H., 27 Jun 2024, (Accepted/In press) In: Trends in Microbiology.Research output: Contribution to journal › Review article › peer-review
Open Access1 Citation (Scopus) -
Chemical mutagenesis and thermal selection of coral photosymbionts induce adaptation to heat stress with trait trade-offs
Scharfenstein, H. J., Alvarez-Roa, C., Peplow, L. M., Buerger, P., Chan, W. Y. & van Oppen, M. J. H., Sept 2023, In: Evolutionary Applications. 16, 9, p. 1549-1567 19 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile5 Citations (Scopus)70 Downloads (Pure) -
Flow cytometry-based biomarker assay for in vitro identification of microalgal symbionts conferring heat tolerance on corals
Buerger, P., Buler, M., Yeap, H. L., Edwards, O. R., van Oppen, M. J. H., Oakeshott, J. G. & Court, L., 2023, In: Frontiers in Marine Science. 10, p. 1-16 16 p., 1094792.Research output: Contribution to journal › Article › peer-review
Open AccessFile5 Citations (Scopus)67 Downloads (Pure)