• 1254 Citations
  • 18 h-Index
20032020

Research output per year

If you made any changes in Pure these will be visible here soon.

Research Outputs

2020

Alternative dietary protein and water temperature influence the skin and gut microbial communities of yellowtail kingfish (Seriola lalandi)

Horlick, J., Booth, M. A. & Tetu, S. G., 19 Mar 2020, In : PeerJ. 8, p. 1-29 29 p., e8705.

Research output: Contribution to journalArticle

Open Access
File
1 Downloads (Pure)

Application of transposon insertion sequencing to agricultural science

Fabian, B. K., Tetu, S. G. & Paulsen, I. T., 18 Mar 2020, In : Frontiers in Plant Science. 11, p. 1-15 15 p., 291.

Research output: Contribution to journalArticle

Open Access
File
1 Citation (Scopus)
5 Downloads (Pure)

A synthesis of bacterial and archaeal phenotypic trait data

Madin, J. S., Nielsen, D. A., Brbic, M., Corkrey, R., Danko, D., Edwards, K., Engqvist, M. K. M., Fierer, N., Geoghegan, J. L., Gillings, M., Kyrpides, N. C., Litchman, E., Mason, C. E., Moore, L., Nielsen, S. L., Paulsen, I. T., Price, N. D., Reddy, T. B. K., Richards, M. A., Rocha, E. P. C. & 9 others, Schmidt, T. M., Shaaban, H., Shukla, M., Supek, F., Tetu, S. G., Vieira-Silva, S., Wattam, A. R., Westfall, D. A. & Westoby, M., 5 Jun 2020, In : Scientific Data. 7, p. 170 8 p., 170.

Research output: Contribution to journalArticle

Open Access
File
1 Downloads (Pure)

Conserving the holobiont

Carthey, A. J. R., Blumstein, D. T., Gallagher, R. V., Tetu, S. G. & Gillings, M. R., Apr 2020, In : Functional Ecology. 34, 4, p. 764-776 13 p.

Research output: Contribution to journalArticle

Open Access

How will marine plastic pollution affect bacterial primary producers?

Tetu, S. G., Sarker, I. & Moore, L. R., 5 Feb 2020, In : Communications Biology. 3, 4 p., 55.

Research output: Contribution to journalComment/opinion

Open Access
File

Subsurface Stappia: success through defence, specialisation and putative pressure-dependent carbon fixation

Vick, S. H. W., Greenfield, P., Willows, R. D., Tetu, S. G., Midgley, D. J. & Paulsen, I. T., Jul 2020, In : Microbial Ecology. 80, 1, p. 34-46 13 p.

Research output: Contribution to journalArticle

The peril and promise of integrons: beyond antibiotic resistance

Ghaly, T. M., Geoghegan, J. L., Tetu, S. G. & Gillings, M. R., Jun 2020, In : Trends in Microbiology. 28, 6, p. 455-464 10 p.

Research output: Contribution to journalReview article

2019

Genomic and phenotypic insights point to diverse ecological strategies by facultative anaerobes obtained from subsurface coal seams

Vick, S. H. W., Greenfield, P., Tetu, S. G., Midgley, D. J. & Paulsen, I. T., 7 Nov 2019, In : Scientific Reports. 9, p. 1-13 13 p., 16186.

Research output: Contribution to journalArticle

Open Access
File
9 Downloads (Pure)
Open Access
File
10 Citations (Scopus)
22 Downloads (Pure)

Succession patterns and physical niche partitioning in microbial communities from subsurface coal seams

Vick, S. H. W., Greenfield, P., Pinetown, K. L., Sherwood, N., Gong, S., Tetu, S. G., Midgley, D. J. & Paulsen, I. T., 22 Feb 2019, In : iScience. 12, p. 152-167 16 p.

Research output: Contribution to journalArticle

Open Access
File
6 Citations (Scopus)
3 Downloads (Pure)

Who eats what? Unravelling microbial conversion of coal to methane

Vick, S. H. W., Gong, S., Sestak, S., Vergara, T. J., Pinetown, K. L., Li, Z., Greenfield, P., Tetu, S. G., Midgley, D. J. & Paulsen, I. T., Jul 2019, In : FEMS Microbiology Ecology. 95, 7, p. 1-14 14 p., fiz093.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2018

A transcriptomic approach to identify novel drug efflux pumps in bacteria

Li, L., Tetu, S. G., Paulsen, I. T. & Hassan, K. A., 2018, Bacterial multidrug exporters: methods and protocols. Yamaguchi, A. & Nishino, K. (eds.). New York, NY: Humana Press Inc., Vol. 1700. p. 221-235 15 p. (Methods in molecular bioogy; vol. 1700). (Springer Protocols Handbooks).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Citation (Scopus)

Fiber supplements derived from sugarcane stem, wheat dextrin and psyllium husk have different in vitro effects on the human gut microbiota

Gamage, H. K. A. H., Tetu, S. G., Chong, R. W. W., Bucio-Noble, D., Rosewarne, C. P., Kautto, L., Ball, M. S., Molloy, M. P., Packer, N. H. & Paulsen, I. T., 20 Jul 2018, In : Frontiers in Microbiology. 9, p. 1-16 16 p., 1618.

Research output: Contribution to journalArticle

Open Access
File
3 Citations (Scopus)
22 Downloads (Pure)

Long-term irrigation affects the dynamics and activity of the wheat rhizosphere microbiome

Mavrodi, D. V., Mavrodi, O. V., Elbourne, L. D. H., Tetu, S., Bonsall, R. F., Parejko, J., Yang, M., Paulsen, I. T., Weller, D. M. & Thomashow, L. S., 21 Mar 2018, In : Frontiers in Plant Science. 9, p. 1-15 15 p., 345.

Research output: Contribution to journalArticle

Open Access
File
14 Citations (Scopus)
4 Downloads (Pure)

The Coal Seam Microbiome (CSMB) reference set, a lingua franca for the microbial coal-to-methane community

Vick, S. H. W., Greenfield, P., Tran-Dinh, N., Tetu, S. G., Midgley, D. J. & Paulsen, I. T., 1 Feb 2018, In : International Journal of Coal Geology. 186, p. 41-50 10 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)
2017

Cereal products derived from wheat, sorghum, rice and oats alter the infant gut microbiota in vitro

Gamage, H. K. A. H., Tetu, S. G., Chong, R. W. W., Ashton, J., Packer, N. H. & Paulsen, I. T., 30 Oct 2017, In : Scientific Reports. 7, 1, p. 1-12 12 p., 14312.

Research output: Contribution to journalArticle

Open Access
File
9 Citations (Scopus)
5 Downloads (Pure)

Genomics and the evolution of antibiotic resistance

Gillings, M. R., Paulsen, I. T. & Tetu, S. G., 1 Jan 2017, In : Annals of the New York Academy of Sciences. 1388, 1, p. 92-107 16 p.

Research output: Contribution to journalArticle

20 Citations (Scopus)
70 Citations (Scopus)
26 Downloads (Pure)
2016

Colony location and captivity influence the gut microbial community composition of the Australian sea lion (Neophoca cinerea)

Delport, T. C., Power, M. L., Harcourt, R. G., Webster, K. N. & Tetu, S. G., 1 Jun 2016, In : Applied and Environmental Microbiology. 82, 12, p. 3440-3449 10 p.

Research output: Contribution to journalArticle

23 Citations (Scopus)

Effects of low temperature on tropical and temperate isolates of marine Synechococcus

Varkey, D., Mazard, S., Ostrowski, M., Tetu, S. G., Haynes, P. & Paulsen, I. T., 1 May 2016, In : ISME Journal. 10, 5, p. 1252-1263 12 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)

Revealing colonisation and biofilm formation of an adherent coal seam associated microbial community on a coal surface

Vick, S. H. W., Tetu, S. G., Sherwood, N., Pinetown, K., Sestak, S., Vallotton, P., Elbourne, L. D. H., Greenfield, P., Johnson, E., Barton, D., Midgley, D. J. & Paulsen, I. T., 15 Apr 2016, In : International Journal of Coal Geology. 160-161, p. 42-50 9 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)
2015

Ecology and evolution of the human microbiota: Fire, farming and antibiotics

Gillings, M. R., Paulsen, I. T. & Tetu, S. G., 8 Sep 2015, In : Genes. 6, 3, p. 841-857 17 p.

Research output: Contribution to journalReview article

Open Access
File
36 Citations (Scopus)
33 Downloads (Pure)

Genomic analyses of Clostridium perfringens isolates from five toxinotypes

Hassan, K. A., Elbourne, L. D. H., Tetu, S. G., Melville, S. B., Rood, J. I. & Paulsen, I. T., 1 May 2015, In : Research in Microbiology. 166, 4, p. 255-263 9 p.

Research output: Contribution to journalArticle

26 Citations (Scopus)

Microbial slime curtain communities of the Nullarbor Caves

Tetu, S. G., Elbourne, L. D. H., Cronan, A., Holmes, A. J., Gillings, M. R. & Paulsen, I. T., 2015, Microbial life of cave systems. Summers Engel, A. (ed.). Berlin: De Gruyter, p. 125-136 12 p. (Life in extreme environments).

Research output: Chapter in Book/Report/Conference proceedingChapter

2014

Biolog phenotype microarrays for phenotypic characterization of microbial cells

Mackie, A. M., Hassan, K. A., Paulsen, I. T. & Tetu, S. G., 2014, Environmental microbiology: Methods and protocols. Paulsen, I. T. & Holmes, A. J. (eds.). 2nd ed. Totowa, NJ: Humana Press, p. 123-130 8 p. (Methods in molecular biology; vol. 1096).

Research output: Chapter in Book/Report/Conference proceedingChapter

15 Citations (Scopus)

Genome sequence of the neurotoxigenic Clostridium butyricum strain 5521

Hassan, K. A., Elbourne, L. D. H., Tetu, S. G., Johnson, E. A. & Paulsen, I. T., 26 Jun 2014, In : Genome Announcements. 2, 3, p. 1-2 2 p., e00632-14.

Research output: Contribution to journalArticle

Open Access
File
6 Citations (Scopus)

Next generation barcode tagged sequencing for monitoring microbial community dynamics

Breakwell, K., Tetu, S. G. & Elbourne, L. D. H., 2014, Environmental Microbiology: Methods and Protocols. Paulsen, I. T. & Holmes, A. J. (eds.). 2nd ed. Totowa, NJ: Humana Press, p. 101-110 10 p. (Methods in Molecular Biology; vol. 1096).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Citation (Scopus)
Open Access
File
3 Citations (Scopus)
21 Downloads (Pure)
2013

Genome sequence of the group III Clostridium botulinum strain Eklund-C

Hassan, K. A., Tetu, S. G., Elbourne, L. D. H., Johnson, E. A. & Paulsen, I. T., 2013, In : Genome Announcements. 1, 2, p. 1-2 2 p., e00044-13.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Impact of DNA damaging agents on genome-wide transcriptional profiles in two marine Synechococcus species

Tetu, S. G., Johnson, D. A., Varkey, D., Phillippy, K., Stuart, R. K., Dupont, C. L., Hassan, K. A., Palenik, B. & Paulsen, I. T., 2013, In : Frontiers in Microbiology. 4, p. 1-15 15 p., 232.

Research output: Contribution to journalArticle

Open Access
File
11 Citations (Scopus)
5 Downloads (Pure)

Life in the dark: Metagenomic evidence that a microbial slime community is driven by inorganic nitrogen metabolism

Tetu, S. G., Breakwell, K., Elbourne, L. D. H., Holmes, A. J., Gillings, M. R. & Paulsen, I. T., Jun 2013, In : ISME Journal. 7, 6, p. 1227-1236 10 p.

Research output: Contribution to journalArticle

29 Citations (Scopus)

Stress effects caused by the expression of a mutant cellobiohydrolase I and proteasome inhibition in Trichoderma reesei Rut-C30

Kautto, L., Grinyer, J., Paulsen, I., Tetu, S., Pillai, A., Pardiwalla, S., Sezerman, U., Akcapinar, G. B., Bergquist, P., Te'o, J. & Nevalainen, H., 25 Jan 2013, In : New Biotechnology. 30, 2, p. 183-191 9 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)

The complete genome and phenome of a community-acquired Acinetobacter baumannii

Farrugia, D. N., Elbourne, L. D. H., Hassan, K. A., Eijkelkamp, B. A., Tetu, S. G., Brown, M. H., Shah, B. S., Peleg, A. Y., Mabbutt, B. C. & Paulsen, I. T., 19 Mar 2013, In : PLoS ONE. 8, 3, p. 1-13 13 p., e58628.

Research output: Contribution to journalArticle

Open Access
File
45 Citations (Scopus)
42 Downloads (Pure)

Transcriptomic and biochemical analyses identify a family of chlorhexidine efflux proteins

Hassan, K. A., Jackson, S. M., Penesyan, A., Patching, S. G., Tetu, S. G., Eijkelkamp, B. A., Brown, M. H., Henderson, P. J. F. & Paulsen, I. T., 10 Dec 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 50, p. 20254-20259 6 p.

Research output: Contribution to journalArticle

62 Citations (Scopus)
2012

Comparative genomics of plant-associated Pseudomonas spp. insights into diversity and inheritance of traits involved in multitrophic interactions

Loper, J. E., Hassan, K. A., Mavrodi, D. V., Davis, E. W., Lim, C. K., Shaffer, B. T., Elbourne, L. D. H., Stockwell, V. O., Hartney, S. L., Breakwell, K., Henkels, M. D., Tetu, S. G., Rangel, L. I., Kidarsa, T. A., Wilson, N. L., van de Mortel, J. E., Song, C., Blumhagen, R., Radune, D., Hostetler, J. B. & 15 others, Brinkac, L. M., Durkin, A. S., Kluepfel, D. A., Wechter, W. P., Anderson, A. J., Kim, Y. C., Pierson, L. S., Pierson, E. A., Lindow, S. E., Kobayashi, D. Y., Raaijmakers, J. M., Weller, D. M., Thomashow, L. S., Allen, A. E. & Paulsen, I. T., Jul 2012, In : PLoS Genetics. 8, 7, p. 1-27 27 p., e1002784.

Research output: Contribution to journalArticle

331 Citations (Scopus)

Geochemical and microbial diversity of bundera sinkhole, an anchialine system in the eastern Indian Ocean

Humphreys, W., Tetu, S., Elbourne, L., Gillings, M., Seymour, J., Mitchell, J. & Paulsen, I., Sep 2012, In : Natura Croatica. 21, Suppl.1, p. 59-63 5 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)

The effect of iron limitation on the transcriptome and proteome of Pseudomonas fluorescens Pf-5

Lim, C. K., Hassan, K. A., Tetu, S. G., Loper, J. E. & Paulsen, I. T., 18 Jun 2012, In : PLoS ONE. 7, 6, p. 1-18 18 p., e39139.

Research output: Contribution to journalArticle

Open Access
File
42 Citations (Scopus)
14 Downloads (Pure)
2011

Complete sequence of pJIE143, a pir-type plasmid carrying ISEcp1-bla CTX-M-15 from an Escherichia coli ST131 isolate

Partridge, S. R., Ellem, J. A., Tetu, S. G., Zong, Z., Paulsen, I. T. & Iredell, J. R., Dec 2011, In : Antimicrobial Agents and Chemotherapy. 55, 12, p. 5933-5935 3 p.

Research output: Contribution to journalArticle

34 Citations (Scopus)
2010

Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7

Roy, P. H., Tetu, S. G., Larouche, A., Elbourne, L., Tremblay, S., Ren, Q., Dodson, R., Harkins, D., Shay, R., Watkins, K., Mahamoud, Y. & Paulsen, I. T., 22 Jan 2010, In : PLoS ONE. 5, 1, p. 1-10 10 p., e8842.

Research output: Contribution to journalArticle

145 Citations (Scopus)

PtrA is required for coordinate regulation of gene expression during phosphate stress in a marine Synechococcus

Ostrowski, M., Mazard, S., Tetu, S. G., Phillippy, K., Johnson, A., Palenik, B., Paulsen, I. T. & Scanlan, D. J., Jul 2010, In : ISME Journal. 4, 7, p. 908-921 14 p.

Research output: Contribution to journalArticle

30 Citations (Scopus)
2009
38 Citations (Scopus)

Microarray analysis of phosphate regulation in the marine cyanobacterium synechococcus sp. WH8102

Tetu, S. G., Brahamsha, B., Johnson, D. A., Tai, V., Phillippy, K., Palenik, B. & Paulsen, I. T., Jul 2009, In : ISME Journal. 3, 7, p. 835-849 15 p.

Research output: Contribution to journalArticle

71 Citations (Scopus)
2008
20 Citations (Scopus)

High-throughput phenotypic characterization of Pseudomonas aeruginosa membrane transport genes

Johnson, D. A., Tetu, S. G., Phillippy, K., Chen, J., Ren, Q. & Paulsen, I. T., Oct 2008, In : PLoS Genetics. 4, 10, p. 1-11 11 p., e1000211.

Research output: Contribution to journalArticle

34 Citations (Scopus)
2007

The Flaveria bidentis β-carbonic anhydrase gene family encodes cytosolic and chloroplastic isoforms demonstrating distinct organ-specific expression patterns

Tetu, S. G., Tanz, S. K., Vella, N., Burnell, J. N. & Ludwig, M., Jul 2007, In : Plant Physiology. 144, 3, p. 1316-1327 12 p.

Research output: Contribution to journalArticle

36 Citations (Scopus)
2004

An unusual integron in Treponema denticola

Coleman, N., Tetu, S., Wilson, N. & Holmes, A., Nov 2004, In : Microbiology. 150, 11, p. 3524-3526 3 p.

Research output: Contribution to journalComment/opinion

17 Citations (Scopus)
2003

Carbonic Anhydrase Transcript Abundance in C3 and C4 Flaveria Species Using a Quantitative, Real-Time PCR Assay

Tanz, S., Tetu, S., Hancock, N. & Ludwig, M., 2003, p. 186-186. 1 p.

Research output: Contribution to conferenceAbstract