• 698 Citations
  • 13 h-Index
20102022

Research output per year

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Research Outputs

2019

Demyelination precedes axonal loss in the transneuronal spread of human neurodegenerative disease

You, Y., Joseph, C., Wang, C., Gupta, V., Liu, S., Yiannikas, C., Chua, B., Chitranshi, N., Shen, T., Dheer, Y., Invernizzi, A., Borotkanics, R., Barnett, M., Graham, S. L. & Klistorner, A., 1 Feb 2019, In : Brain; a journal of neurology. 142, 2, p. 426-442 17 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)

Differing structural and functional patterns of optic nerve damage in multiple sclerosis and neuromyelitis optica spectrum disorder

Shen, T., You, Y., Arunachalam, S., Fontes, A., Liu, S., Gupta, V., Parratt, J., Wang, C., Barnett, M., Barton, J., Chitranshi, N., Zhu, L., Fraser, C. L., Graham, S. L., Klistorner, A. & Yiannikas, C., Mar 2019, In : Ophthalmology. 126, 3, p. 445-453 9 p.

Research output: Contribution to journalArticle

16 Citations (Scopus)
2018

A deep learning-based algorithm identifies glaucomatous discs using monoscopic fundus photographs

Liu, S., Graham, S. L., Schulz, A., Kalloniatis, M., Zangerl, B., Cai, W., Gao, Y., Chua, B., Klistorner, A. & You, Y., 15 Jul 2018, In : Ophthalmology Glaucoma. 1, 1, p. 15-22 8 p.

Research output: Contribution to journalArticle

A deep learning based semantic segmentation framework for multiple sclerosis in MRI

Song, Y., Liu, S., Zhang, C., Lill, S., Wang, C., Gao, Y., Tang, Z., You, Y., Klistorner, A., Barnett, M. & Cai, W., Oct 2018, In : Multiple Sclerosis Journal. 24, 2 Supplement, p. 861-2 2 p., EP1522.

Research output: Contribution to journalMeeting abstract

1 Citation (Scopus)

Alteration of visual cortical microstructure is associated with pathology along the optic radiation in patients with MS: an asymmetry analysis of posterior visual pathway

Wang, C., Klistorner, A., Barton, J., Beadnall, H., Ly, L., Liu, S., Garber, J., Reddel, S. & Barnett, M., Oct 2018, In : Multiple Sclerosis Journal. 24, 2 Supplement, p. 223 1 p., P496.

Research output: Contribution to journalMeeting abstract

Altered brain structure and functional connectivity of primary visual cortex in optic neuritis

Huang, J., Duan, Y., Liu, S., Liang, P., Ren, Z., Gao, Y., Liu, Y., Zhang, X., Lu, J. & Li, K., 20 Dec 2018, In : Frontiers in Human Neuroscience. 12, p. 1-7 7 p., 473.

Research output: Contribution to journalArticle

Open Access
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2 Citations (Scopus)

Anterograde microstructural changes along the visual pathways in optic neuritis

You, Y., Wang, C., Liu, S., Graham, S. L. & Klistorner, A., Jan 2018, In : Investigative Ophthalmology & Visual Science. 59, 9, 1 p., 615.

Research output: Contribution to journalMeeting abstract

Automatic segmentation of thigh muscle in longitudinal 3D T1-weighted magnetic resonance (MR) images

Tang, Z., Wang, C., Hoang, P., Liu, S., Cai, W., Soligo, D., Oliver, R., Barnett, M. & Fornusek, C., 1 Jan 2018, Data driven treatment response assessment and preterm, perinatal, and paediatric image analysis: First International Workshop, DATRA 2018 and Third International Workshop, PIPPI 2018 Held in Conjunction with MICCAI 2018, Proceedings. Melbourne, A., Licandro, R., DiFranco, M., Rota, P., Gau, M., Kampel, M., Aughwane, R., Moeskops, P., Schwartz, E., Robinson, E. & Makropoulos, A. (eds.). Springer-VDI-Verlag GmbH & Co. KG, p. 14-21 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11076 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

Brain atrophy correction in longitudinal neuroimaging analysis of chronic white matter lesions

Liu, S., Klistorner, A., Wang, C., Gao, Y., Song, Y., Regmi, S., Gilchrist, B., Ly, L., Cai, W. & Barnett, M., Oct 2018, In : Multiple Sclerosis Journal. 24, 862, p. 862 1 p., EP1523.

Research output: Contribution to journalMeeting abstract

Diffusivity data suggests progressive lesion-independent demyelination in NAWM of MS patients: a 5 year study

Klistorner, A., Wang, C., Liu, S., Graham, L. & Barnett, M., Oct 2018, In : Multiple Sclerosis Journal. 24, 2 Supplement, p. 430 1 p., P820.

Research output: Contribution to journalMeeting abstract

Digital to analog resistive switching transition induced by graphene buffer layer in strontium titanate based devices

Wan, T., Qu, B., Du, H., Lin, X., Lin, Q., Wang, D. W., Cazorla, C., Li, S., Liu, S. & Chu, D., 15 Feb 2018, In : Journal of Colloid and Interface Science. 512, p. 767-774 8 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Evidence of progressive tissue loss in the core of chronic MS lesions: a longitudinal DTI study

Klistorner, A., Wang, C., Yiannikas, C., Parratt, J., Dwyer, M., Barton, J., Graham, S. L., You, Y., Liu, S. & Barnett, M. H., 2018, In : NeuroImage: Clinical. 17, p. 1028-1035 8 p.

Research output: Contribution to journalArticle

Open Access
File
6 Citations (Scopus)
20 Downloads (Pure)

Feature learning with component selective encoding for histopathology image classification

Song, Y., Chang, H., Gao, Y., Liu, S., Zhang, D., Yao, J., Chrzanowski, W. & Cai, W., 23 May 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. Institute of Electrical and Electronics Engineers (IEEE), Vol. 2018-April. p. 257-260 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

5 Citations (Scopus)

Free water elimination improves tractography through multiple sclerosis lesions

Gilchrist, B., Liu, S., Wang, C., Pasternak, O., You, Y. & Klistorner, A., Jun 2018. 3 p.

Research output: Contribution to conferencePaper

MS-GAN: GAN-based semantic segmentation of multiple sclerosis lesions in brain magnetic resonance imaging

Zhang, C., Song, Y., Liu, S., Lill, S., Wang, C., Tang, Z., You, Y., Gao, Y., Klistorner, A., Barnett, M. & Cai, W., 2018, 2018 International Conference on Digital Image Computing: Techniques and Applications, DICTA 2018. Murshed, M., Paul, M., Asikuzzaman, M., Pickering, M., Natu, A., Robles-Kelly, A., You, S., Zheng, L. & Rahman, A. (eds.). Piscataway, NJ: Institute of Electrical and Electronics Engineers (IEEE), p. 84-91 8 p. 8615771

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

2 Citations (Scopus)

Personalized lesion profiling in multiple sclerosis

Liu, S., Klistorner, A., Wang, C., Gao, Y., Gilchrist, B., Song, Y., You, Y., Yao, J., Cai, W. & Barnett, M., Jun 2018. 2 p.

Research output: Contribution to conferencePaper

Understanding memory impairment in multiple sclerosis contributions of macro and micro-structural alterations in the thalamus and hippocampus

Devenney, E., Wang, T., Beadnall, H., Ly, L., Dawes, C., Liu, S. & Barnett, M., Oct 2018, In : Multiple Sclerosis Journal. 24, 2 Supplement, p. 609 1 p.

Research output: Contribution to journalMeeting abstract

Whole Slide Image classification via iterative patch labelling

Zhang, C., Song, Y., Zhang, D., Liu, S., Chen, M. & Cai, W., Oct 2018, 2018 25th IEEE International Conference on Image Processing (ICIP): proceedings. Institute of Electrical and Electronics Engineers (IEEE), p. 1408-1412 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

1 Citation (Scopus)
2017

Lung nodule classification by jointly using visual descriptors and deep features

Xie, Y., Zhang, J., Liu, S., Cai, W. & Xia, Y., 1 Jan 2017, Medical computer vision and Bayesian and graphical models for biomedical imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Revised Selected Papers. Muller, H., Kelm, B. M., Arbel, T., Cai, W., Cardoso, M. J., Langs, G., Menze, B., Metaxas, D., Montillo, A., Wells III, W. M., Zhang, S., Chung, A. C. S., Jenkinson, M. & Ribbens, A. (eds.). Springer-VDI-Verlag GmbH & Co. KG, p. 116-125 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10081 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

9 Citations (Scopus)

Multimodal neuroimaging computing for the characterization of neurodegenerative disorders

Liu, S., 10 Jan 2017, Singapore: Springer, Springer Nature. 136 p. (Springer Thesis Series)

Research output: Book/ReportBook

2016

Clique identification and propagation for multimodal brain tumor image segmentation

Liu, S., Song, Y., Zhang, F., Feng, D., Fulham, M. & Cai, W., 1 Jan 2016, Brain informatics and health: International Conference, BIH 2016, Proceedings. Ascoli, G. A., Hawrylycz, M., Ali, H., Khazanchi, D. & Shi, Y. (eds.). Springer-VDI-Verlag GmbH & Co. KG, p. 285-294 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9919 LNAI).

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

1 Citation (Scopus)

Cross-view neuroimage pattern analysis in Alzheimer's disease staging

Liu, S., Cai, W., Pujol, S., Kikinis, R., Feng, D. D. & Alzheimer's Disease Neuroimaging Initiative, 23 Feb 2016, In : Frontiers in Aging Neuroscience. 8, FEB, p. 1-15 15 p., 23.

Research output: Contribution to journalArticle

Open Access
File
3 Citations (Scopus)
2 Downloads (Pure)

Dictionary pruning with visual word significance for medical image retrieval

Zhang, F., Song, Y., Cai, W., Hauptmann, A. G., Liu, S., Pujol, S., Kikinis, R., Fulham, M. J., Feng, D. D. & Chen, M., 12 Feb 2016, In : Neurocomputing. 177, p. 75-88 14 p.

Research output: Contribution to journalArticle

16 Citations (Scopus)

Pairwise latent semantic association for similarity computation in medical imaging

Zhang, F., Song, Y., Cai, W., Liu, S., Liu, S., Pujol, S., Kikinis, R., Xia, Y., Fulham, M. J., Feng, D. D. & Alzheimer's Disease Neuroimaging Initiative, 1 May 2016, In : IEEE Transactions on Biomedical Engineering. 63, 5, p. 1058-1069 12 p., 7254153.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Reconstruction of 3D neuron morphology using Rivulet back-tracking

Zhang, D., Liu, S., Liu, S., Feng, D., Peng, H. & Cai, W., 15 Jun 2016, 2016 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2016 - Proceedings. Institute of Electrical and Electronics Engineers (IEEE), Vol. 2016-June. p. 598-601 4 p. 7493339

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

5 Citations (Scopus)

Rivulet: 3D neuron morphology tracing with iterative back-tracking

Liu, S., Zhang, D., Liu, S., Feng, D., Peng, H. & Cai, W., 1 Oct 2016, In : Neuroinformatics. 14, 4, p. 387-401 15 p.

Research output: Contribution to journalArticle

23 Citations (Scopus)
2015

Content-based retrieval of brain diffusion magnetic resonance image

Liu, S., Hadi, N., Liu, S., Pujol, S., Kikinis, R., Zhang, F., Feng, D. & Cai, W., 1 Jan 2015, Multimodal Retrieval in the Medical Domain: First International Workshop, MRMD 2015, Revised Selected Papers. Müller H., H., del Toro, O. A. J., Hanbury, A., Langs, G. & Rodríguez, A. F. (eds.). Cham: Springer-VDI-Verlag GmbH & Co. KG, p. 54-60 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9059).

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

1 Citation (Scopus)

Latent semantic association for medical image retrieval

Zhang, F., Song, Y., Liu, S., Pujol, S., Kikinis, R., Feng, D. & Cai, W., 12 Jan 2015, 2014 International Conference on Digital Image Computing: Techniques and Applications, DICTA 2014. Phung, S. L., Bouzerdoum, A., Ogunbona, P., Li, W. & Wang, L. (eds.). Institute of Electrical and Electronics Engineers (IEEE), 6 p. 7008114

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

2 Citations (Scopus)

Longitudinal brain MR retrieval with diffeomorphic demons registration: what happened to those patients with similar changes?

Liu, S., Liu, S., Zhang, F., Cai, W., Pujol, S., Kikinis, R. & Feng, D., 1 Jan 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging, ISBI 2015. Institute of Electrical and Electronics Engineers (IEEE), Vol. 2015-July. p. 588-591 4 p. 7163942

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

7 Citations (Scopus)

Motion representation of ciliated cell images with contour-alignment for automated CBF estimation

Zhang, F., Song, Y., Liu, S., Young, P., Traini, D., Morgan, L., Ong, H-X., Buddle, L., Liu, S., Feng, D. & Cai, W., 2015, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015: 18th International Conference : Munich, Germany, October 5-9, 2015 : proceedings, part III. Navab, N., Hornegger, J., Wells, W. M. & Frangi, A. F. (eds.). Cham: Springer, Springer Nature, p. 300-307 8 p. (Lecture notes in computer science; vol. 9351).

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

Multimodal neuroimaging computing: a review of the applications in neuropsychiatric disorders

Liu, S., Cai, W., Liu, S., Zhang, F., Fulham, M., Feng, D., Pujol, S. & Kikinis, R., 1 Sep 2015, In : Brain Informatics. 2, 3, p. 167-180 14 p.

Research output: Contribution to journalReview article

Open Access
File
39 Citations (Scopus)

Multimodal neuroimaging computing: the workflows, methods, and platforms

Liu, S., Cai, W., Liu, S., Zhang, F., Fulham, M., Feng, D., Pujol, S. & Kikinis, R., 1 Sep 2015, In : Brain Informatics. 2, 3, p. 181-195 15 p.

Research output: Contribution to journalReview article

Open Access
File
10 Citations (Scopus)
14 Downloads (Pure)

Multimodal neuroimaging feature learning for multiclass diagnosis of Alzheimer's disease

Liu, S., Liu, S., Cai, W., Che, H., Pujol, S., Kikinis, R., Feng, D., Fulham, M. J. & ADNI, 1 Apr 2015, In : IEEE Transactions on Biomedical Engineering. 62, 4, p. 1132-1140 9 p., 6963480.

Research output: Contribution to journalArticle

160 Citations (Scopus)

Multi-phase feature representation learning for neurodegenerative disease diagnosis

Liu, S., Liu, S., Cai, W., Pujol, S., Kikinis, R. & Feng, D. D., 1 Jan 2015, Artificial Life and Computational Intelligence: First Australasian Conference, ACALCI 2015, Proceedings. Chalup, S. K., Blair, A. D. & Randall, M. (eds.). Cham: Springer-VDI-Verlag GmbH & Co. KG, p. 350-359 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8955).

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

7 Citations (Scopus)

Ranking-based vocabulary pruning in bag-of-features for image retrieval

Zhang, F., Song, Y., Cai, W., Hauptmann, A. G., Liu, S., Liu, S., Feng, D. D. & Chen, M., 1 Jan 2015, Artificial Life and Computational Intelligence: First Australasian Conference, ACALCI 2015, Proceedings. Chalup, S. K., Blair, A. D. & Randall, M. (eds.). Cham: Springer-VDI-Verlag GmbH & Co. KG, p. 436-445 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8955).

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

5 Citations (Scopus)

Subject-centered multi-view feature fusion for neuroimaging retrieval and classification

Liu, S., Cai, W., Liu, S., Pujol, S., Kikinis, R. & Feng, D., 9 Dec 2015, 2015 IEEE International Conference on Image Processing, ICIP 2015: Proceedings. Institute of Electrical and Electronics Engineers (IEEE), Vol. 2015-December. p. 2505-2509 5 p. 7351253

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

4 Citations (Scopus)
2014

A 3D difference-of-Gaussian-based lesion detector for brain PET

Cai, W., Liu, S., Song, Y., Pujol, S., Kikinis, R. & Feng, D., 2 May 2014, 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014. Institute of Electrical and Electronics Engineers (IEEE), p. 677-680 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

Automated feedback extraction for medical imaging retrieval

Cai, W., Zhang, F., Song, Y., Liu, S., Wen, L., Eberl, S., Fulham, M. & Feng, D., 1 Jan 2014, 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014. Institute of Electrical and Electronics Engineers (IEEE), p. 907-910 4 p. 6868018

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

6 Citations (Scopus)

Co-neighbor multi-view spectral embedding for medical content-based retrieval

Che, H., Liu, S., Cai, W., Pujol, S., Kikinis, R. & Feng, D., 1 Jan 2014, 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014. Institute of Electrical and Electronics Engineers (IEEE), p. 911-914 4 p. 6868019

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

9 Citations (Scopus)

Early diagnosis of Alzheimer's disease with deep learning

Liu, S., Liu, S., Cai, W., Pujol, S., Kikinis, R. & Feng, D., 1 Jan 2014, 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014. Institute of Electrical and Electronics Engineers (IEEE), p. 1015-1018 4 p. 6868045

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

131 Citations (Scopus)

Hierarchical and binary spatial descriptors for lung nodule image retrieval

Ng, G., Song, Y., Cai, W., Zhou, Y., Liu, S. & Dagan Feng, D., 2 Nov 2014, 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014. Institute of Electrical and Electronics Engineers (IEEE), p. 6463-6466 4 p. 6945108

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

5 Citations (Scopus)

High-level feature based PET image retrieval with deep learning architecture

Liu, S., Liu, S., Cai, W., Che, H., Pujol, S., Kikinis, R., Fulham, M. & Feng, D., 18 Aug 2014, In : The Journal of Nuclear Medicine. 55, Supplement 1, 1 p., 2028.

Research output: Contribution to journalMeeting abstract

Multi-Channel neurodegenerative pattern analysis and its application in Alzheimer's disease characterization

Liu, S., Cai, W., Wen, L., Feng, D. D., Pujol, S., Kikinis, R., Fulham, M. J., Eberl, S. & ADNI, 1 Jan 2014, In : Computerized Medical Imaging and Graphics. 38, 6, p. 436-444 9 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)

Propagation graph fusion for multi-modal medical content-based retrieval

Liu, S., Liu, S., Pujol, S., Kikinis, R., Feng, D. & Cai, W., 1 Jan 2014, 2014 13th International Conference on Control Automation Robotics and Vision, ICARCV 2014. Institute of Electrical and Electronics Engineers (IEEE), p. 849-854 6 p. 7064415

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

5 Citations (Scopus)

Semantic association for neuroimaging classification of PET images

Zhang, F., Song, Y., Liu, S., Pujol, S., Kikinis, R., Fulham, M., Feng, D. & Cai, W., May 2014, In : The Journal of Nuclear Medicine. 55, Supplement 1, 1 p., 2029.

Research output: Contribution to journalMeeting abstract

2013

A bag of semantic words model for medical content-based retrieval

Liu, S., Cai, W., Song, Y., Pujol, S., Kikinis, R. & Feng, D., 26 Sep 2013, International Workshop on Medical Content-Based Retrieval for Clinical Decision Support 2013. 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

A supervised multiview spectral embedding method for neuroimaging classification

Liu, S., Zhang, L., Cai, W., Song, Y., Wang, Z., Wen, L. & Feng, D. D., 1 Dec 2013, 2013 IEEE International Conference on Image Processing, ICIP 2013 - Proceedings. Institute of Electrical and Electronics Engineers (IEEE), p. 601-605 5 p. 6738124

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

19 Citations (Scopus)

Graph cuts based relevance feedback in image retrieval

Zhang, L., Liu, S., Wang, Z., Cai, W., Song, Y. & Feng, D. D., 1 Dec 2013, 2013 IEEE International Conference on Image Processing, ICIP 2013 - Proceedings. Institute of Electrical and Electronics Engineers (IEEE), p. 4358-4362 5 p. 6738898

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

Localized Sparse Code Gradient in Alzheimer's disease staging

Liu, S., Cai, W., Song, Y., Pujol, S., Kikinis, R., Wen, L. & Feng, D. D., 31 Oct 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2013. Institute of Electrical and Electronics Engineers (IEEE), p. 5398-5401 4 p. 6610769

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

11 Citations (Scopus)

Multi-Channel brain atrophy pattern analysis in neuroimaging retrieval

Liu, S., Cai, W., Wen, L. & Feng, D., 22 Aug 2013, ISBI 2013 - 2013 IEEE 10th International Symposium on Biomedical Imaging: From Nano to Macro. Institute of Electrical and Electronics Engineers (IEEE), p. 202-205 4 p. 6556447

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

15 Citations (Scopus)