Abstract
Breast cancer has become one of the most common malignant tumors in women worldwide, and it seriously threatens women's physical and mental health. In recent years, with the development of Artificial Intelligence(AI) and the accumulation of medical data, AI has begun to be deeply integrated with mammography, MRI, ultrasound, etc. to assist physicians in disease diagnosis. However, the existing breast cancer diagnosis model based on Computer Vision(CV) is greatly affected by the image quality; on the other hand, the breast cancer diagnosis model based on Natural Language Processing(NLP) cannot effectively extract the semantic information of the mammography report. The lack of model interpretability also makes the existing diagnostic models have low confidence. In this paper, we proposed Breast Cancer Causal XAI Diagnostic Model(BCCXDM). Specifically, we first structured the mammography report. Then find the causal graph based on the structured table. We combine the existing tabular learning method TabNet with causal graphs(Causal-TabNet) to enable reasoning in the graphs to preserve the correlation between features. More importantly, we use GNN and node transition probability to aggregate node information. We evaluate our model on the real-world mammography report, and compare it with other popular interpretable methods. The experimental results show that our interpretable results are closer to the diagnostic criteria of clinicians
Original language | English |
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Title of host publication | Proceedings - 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021 |
Editors | Yufei Huang, Lukasz Kurgan, Feng Luo, Xiaohua Tony Hu, Yidong Chen, Edward Dougherty, Andrzej Kloczkowski, Yaohang Li |
Place of Publication | Piscataway, NJ |
Publisher | Institute of Electrical and Electronics Engineers (IEEE) |
Pages | 3341-3349 |
Number of pages | 9 |
ISBN (Electronic) | 9781665401265 |
DOIs | |
Publication status | Published - 2021 |
Event | 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021 - Virtual, Online, United States Duration: 9 Dec 2021 → 12 Dec 2021 |
Conference
Conference | 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021 |
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Country/Territory | United States |
City | Virtual, Online |
Period | 9/12/21 → 12/12/21 |
Keywords
- breast cancer
- interpretability
- mammography report
- causal graph