ASGS: an alternative splicing graph web service

Durgaprasad Bollina, Bernett T K Lee, Tin Wee Tan, Shoba Ranganathan*

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

12 Citations (Scopus)
9 Downloads (Pure)

Abstract

Alternative transcript diversity manifests itself a prime cause of complexity in higher eukaryotes. The Alternative Splicing Graph Server (ASGS) is a web service facilitating the systematic study of alternatively spliced genes of higher eukaryotes by generating splicing graphs for the compact visual representation of transcript diversity from a single gene. Taking a set of transcripts in General Feature Format as input, ASGS identifies distinct reference and variable exons, generates a transcript splicing graph, an exon summary, splicing events classification and a single line graph to facilitate experimental analysis. This freely available web service can be accessed at http://asgs.biolinfo.org.

Original languageEnglish
Pages (from-to)W444-W447
Number of pages4
JournalNucleic Acids Research
Volume34
Issue numberWEB. SERV. ISS.
DOIs
Publication statusPublished - Jul 2006

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