Abstract
Human sapovirus is one of the major causes of viral gastroenteritis. Although the capsid protein (VP1) confers antigenic cross-reactivity, immunity against sapovirus is still unclear. Using immunoinformatics approach, we defined putative T- and B-cell epitopes of VP1 and mapped on to its predicted three-dimensional structure. Identified five putative T-cell epitopes also occupied the putative B-cell epitope region. These putative epitopes were conserved in all existing serotypes. Predicted epitopes can be generated through proteasome cleavage and may be useful in designing peptide-based subunit vaccine to confer both humoral and cell-mediated immunity.
| Original language | English |
|---|---|
| Pages (from-to) | 287-298 |
| Number of pages | 12 |
| Journal | International Journal of Bioinformatics Research and Applications |
| Volume | 7 |
| Issue number | 3 |
| DOIs | |
| Publication status | Published - 2011 |
| Externally published | Yes |
Keywords
- sapovirus
- capsid protein
- vaccine
- homology modelling
- epitope mapping
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