Data from a proteomic baseline study of Assemblage A in Giardia duodenalis

Samantha J. Emery, Ernest Lacey, Paul A. Haynes*

*Corresponding author for this work

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Abstract

Eight Assemblage A strains from the protozoan parasite Giardia duodenalis were analysed using label-free quantitative shotgun proteomics, to evaluate inter- and intra-assemblage variation and complement available genetic and transcriptomic data. Isolates were grown in biological triplicate in axenic culture, and protein extracts were subjected to in-solution digest and online fractionation using Gas Phase Fractionation (GPF). Recent reclassification of genome databases for subassemblages was evaluated for database-dependent loss of information, and proteome composition of different isolates was analysed for biologically relevant assemblage-independent variation. The data from this study are related to the research article ". Quantitative proteomics analysis of Giardia duodenalis Assemblage A - a baseline for host, assemblage and isolate variation" published in Proteomics (Emery et al., 2015 [1]).

Original languageEnglish
Pages (from-to)23-27
Number of pages5
JournalData in Brief
Volume5
DOIs
Publication statusPublished - 1 Dec 2015

Bibliographical note

Version archived for private and non-commercial use with the permission of the author/s and according to publisher conditions. For further rights please contact the publisher.

Keywords

  • Assemblage A
  • Giardia duodenalis
  • Label-free quantitative shotgun proteomics
  • Variant Surface Protein
  • Variable genome
  • Parasite proteomics

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