Abstract
Although dietary supplements are widely used and generally are considered safe, some supplements have been identified as causative agents for adverse reactions, some of which may even be fatal. The Food and Drug Administration (FDA) is responsible for monitoring supplements and ensuring that supplements are safe. However, current surveillance protocols are not always effective. Leveraging user-generated textual data, in the form of Amazon.com reviews for nutritional supplements, we use natural language processing techniques to develop a system for the monitoring of dietary sup- plements. We use topic modeling techniques, specifically a variation of Latent Dirichlet Allocation (LDA), and background knowledge in the form of an adverse reaction dictionary to score products based on their potential danger to the public. Our approach generates topics that semantically cap- ture adverse reactions from a document set consisting of reviews posted by users of specific products, and based on these topics, we propose a scoring mechanism to categorize products as “high potential danger”, “average potential danger” and “low potential danger.” We evaluate our system by com- paring the system categorization with human annotators, and we find that the our system agrees with the annotators 69.4% of the time. With these results, we demonstrate that our methods show promise and that our system represents a proof of concept as a viable low-cost, active approach for dietary supplement monitoring.
Original language | English |
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Title of host publication | Pacific Symposium on Biocomputing 2016 |
Editors | Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Marylyn D. Ritchie, Tiffany Murray, Teri E. Klein |
Place of Publication | Singapore |
Publisher | World Scientific Publishing |
Pages | 528-539 |
Number of pages | 12 |
ISBN (Electronic) | 9789814749411, 9789814749411 |
ISBN (Print) | 9789814749404 |
DOIs | |
Publication status | Published - 2016 |
Externally published | Yes |
Event | 21st Pacific Symposium on Biocomputing, PSB 2016 - Kohala Coast, United States Duration: 4 Jan 2016 → 8 Jan 2016 |
Conference
Conference | 21st Pacific Symposium on Biocomputing, PSB 2016 |
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Country/Territory | United States |
City | Kohala Coast |
Period | 4/01/16 → 8/01/16 |
Keywords
- Dietary supplements
- Latent dirichlet allocation
- Natural language processing
- Pharmacovigilance
- Public health surveillance
- Social media mining