Genome sequence of the ethene- and vinyl chloride-oxidizing actinomycete Nocardioides sp strain JS614

Nicholas V. Coleman; Neil L. Wilson; Kerrie Barry; Thomas S. Brettin; David C. Bruce; Alex Copeland; Eileen Dalin; John C. Detter; Tijana Glavina del Rio; Lynne A. Goodwin; Nancy M. Hammon; Shunsheng Han; Loren J. Hauser; Sanjay Israni; Edwin Kim; Nikolaos Kyrpides; Miriam L. Land; Alla Lapidus; Frank W. Larimer; Susan Lucas; Sam Pitluck; Paul Richardson; Jeremy Schmutz; Roxanne Tapia; Sue Thompson; Hope N. Tice; Jim C. Spain; James G. Gossett; Timothy E. Mattes

doi:10.1128/JB.05109-11

Genome sequence of the ethene- and vinyl chloride-oxidizing actinomycete Nocardioides sp strain JS614

Nicholas V. Coleman^*, Neil L. Wilson, Kerrie Barry, Thomas S. Brettin, David C. Bruce, Alex Copeland, Eileen Dalin, John C. Detter, Tijana Glavina del Rio, Lynne A. Goodwin, Nancy M. Hammon, Shunsheng Han, Loren J. Hauser, Sanjay Israni, Edwin Kim, Nikolaos Kyrpides, Miriam L. Land, Alla Lapidus, Frank W. Larimer, Susan LucasSam Pitluck, Paul Richardson, Jeremy Schmutz, Roxanne Tapia, Sue Thompson, Hope N. Tice, Jim C. Spain, James G. Gossett, Timothy E. Mattes

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

15 Citations (Scopus)

Abstract

Nocardioides sp. strain JS614 grows on ethene and vinyl chloride (VC) as sole carbon and energy sources and is of interest for bioremediation and biocatalysis. Sequencing of the complete genome of JS614 provides insight into the genetic basis of alkene oxidation, supports ongoing research into the physiology and biochemistry of growth on ethene and VC, and provides biomarkers to facilitate detection of VC/ethene oxidizers in the environment. This is the first genome sequence from the genus Nocardioides and the first genome of a VC/ethene-oxidizing bacterium.

Original language	English
Pages (from-to)	3399-3400
Number of pages	2
Journal	Journal of Bacteriology
Volume	193
Issue number	13
DOIs	https://doi.org/10.1128/JB.05109-11
Publication status	Published - Jul 2011
Externally published	Yes

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Coleman, N. V., Wilson, N. L., Barry, K., Brettin, T. S., Bruce, D. C., Copeland, A., Dalin, E., Detter, J. C., del Rio, T. G., Goodwin, L. A., Hammon, N. M., Han, S., Hauser, L. J., Israni, S., Kim, E., Kyrpides, N., Land, M. L., Lapidus, A., Larimer, F. W., ... Mattes, T. E. (2011). Genome sequence of the ethene- and vinyl chloride-oxidizing actinomycete Nocardioides sp strain JS614. Journal of Bacteriology, 193(13), 3399-3400. https://doi.org/10.1128/JB.05109-11

@article{75cc4e8a4d2b4d728ab9ba0b3325c73a,

title = "Genome sequence of the ethene- and vinyl chloride-oxidizing actinomycete Nocardioides sp strain JS614",

abstract = "Nocardioides sp. strain JS614 grows on ethene and vinyl chloride (VC) as sole carbon and energy sources and is of interest for bioremediation and biocatalysis. Sequencing of the complete genome of JS614 provides insight into the genetic basis of alkene oxidation, supports ongoing research into the physiology and biochemistry of growth on ethene and VC, and provides biomarkers to facilitate detection of VC/ethene oxidizers in the environment. This is the first genome sequence from the genus Nocardioides and the first genome of a VC/ethene-oxidizing bacterium.",

author = "Coleman, {Nicholas V.} and Wilson, {Neil L.} and Kerrie Barry and Brettin, {Thomas S.} and Bruce, {David C.} and Alex Copeland and Eileen Dalin and Detter, {John C.} and {del Rio}, {Tijana Glavina} and Goodwin, {Lynne A.} and Hammon, {Nancy M.} and Shunsheng Han and Hauser, {Loren J.} and Sanjay Israni and Edwin Kim and Nikolaos Kyrpides and Land, {Miriam L.} and Alla Lapidus and Larimer, {Frank W.} and Susan Lucas and Sam Pitluck and Paul Richardson and Jeremy Schmutz and Roxanne Tapia and Sue Thompson and Tice, {Hope N.} and Spain, {Jim C.} and Gossett, {James G.} and Mattes, {Timothy E.}",

year = "2011",

month = jul,

doi = "10.1128/JB.05109-11",

language = "English",

volume = "193",

pages = "3399--3400",

journal = "Journal of Bacteriology",

issn = "0021-9193",

publisher = "American Society for Microbiology",

number = "13",

}

Coleman, NV, Wilson, NL, Barry, K, Brettin, TS, Bruce, DC, Copeland, A, Dalin, E, Detter, JC, del Rio, TG, Goodwin, LA, Hammon, NM, Han, S, Hauser, LJ, Israni, S, Kim, E, Kyrpides, N, Land, ML, Lapidus, A, Larimer, FW, Lucas, S, Pitluck, S, Richardson, P, Schmutz, J, Tapia, R, Thompson, S, Tice, HN, Spain, JC, Gossett, JG & Mattes, TE 2011, 'Genome sequence of the ethene- and vinyl chloride-oxidizing actinomycete Nocardioides sp strain JS614', Journal of Bacteriology, vol. 193, no. 13, pp. 3399-3400. https://doi.org/10.1128/JB.05109-11

TY - JOUR

T1 - Genome sequence of the ethene- and vinyl chloride-oxidizing actinomycete Nocardioides sp strain JS614

AU - Coleman, Nicholas V.

AU - Wilson, Neil L.

AU - Barry, Kerrie

AU - Brettin, Thomas S.

AU - Bruce, David C.

AU - Copeland, Alex

AU - Dalin, Eileen

AU - Detter, John C.

AU - del Rio, Tijana Glavina

AU - Goodwin, Lynne A.

AU - Hammon, Nancy M.

AU - Han, Shunsheng

AU - Hauser, Loren J.

AU - Israni, Sanjay

AU - Kim, Edwin

AU - Kyrpides, Nikolaos

AU - Land, Miriam L.

AU - Lapidus, Alla

AU - Larimer, Frank W.

AU - Lucas, Susan

AU - Pitluck, Sam

AU - Richardson, Paul

AU - Schmutz, Jeremy

AU - Tapia, Roxanne

AU - Thompson, Sue

AU - Tice, Hope N.

AU - Spain, Jim C.

AU - Gossett, James G.

AU - Mattes, Timothy E.

PY - 2011/7

Y1 - 2011/7

N2 - Nocardioides sp. strain JS614 grows on ethene and vinyl chloride (VC) as sole carbon and energy sources and is of interest for bioremediation and biocatalysis. Sequencing of the complete genome of JS614 provides insight into the genetic basis of alkene oxidation, supports ongoing research into the physiology and biochemistry of growth on ethene and VC, and provides biomarkers to facilitate detection of VC/ethene oxidizers in the environment. This is the first genome sequence from the genus Nocardioides and the first genome of a VC/ethene-oxidizing bacterium.

AB - Nocardioides sp. strain JS614 grows on ethene and vinyl chloride (VC) as sole carbon and energy sources and is of interest for bioremediation and biocatalysis. Sequencing of the complete genome of JS614 provides insight into the genetic basis of alkene oxidation, supports ongoing research into the physiology and biochemistry of growth on ethene and VC, and provides biomarkers to facilitate detection of VC/ethene oxidizers in the environment. This is the first genome sequence from the genus Nocardioides and the first genome of a VC/ethene-oxidizing bacterium.

U2 - 10.1128/JB.05109-11

DO - 10.1128/JB.05109-11

M3 - Article

C2 - 21551312

SN - 0021-9193

VL - 193

SP - 3399

EP - 3400

JO - Journal of Bacteriology

JF - Journal of Bacteriology

IS - 13

ER -

Genome sequence of the ethene- and vinyl chloride-oxidizing actinomycete Nocardioides sp strain JS614

Abstract

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