Method for monitoring protein digestion

Peter Karuso (Inventor), Hung-yoon Choi (Inventor), Angela S. Crawford (Inventor), Graham Scott (Inventor)

Research output: PatentResearch

Abstract

Methods of monitoring protein or peptide digestion by a proteolytic enzyme, comprising contacting a protein or peptide with a proteolytic enzyme in the presence of a fluorescent dye such as epicocconone or a related dye under conditions which allow digestion of the protein by the proteolytic enzyme and monitoring the fluorescence of the mixture over time. The protein may be a recombinant protein having a tag such as 6X HIS, 10X HIS, FLAG, CBP, HSV, S- tag or HA; or fusion proteins such as GST or MBP. Further, the protein or peptide may be present in a complex protein/peptide mixture, for example a biological sample such as serum or plasma or an entire proteome. The monitoring can be performed on the reaction mixture in real-time or via sampling. The temporal decrease in fluorescence signifies digestion of the protein or peptide by the proteolytic enzyme and the data can be used to extract kinetic rate constants for th digestion. The invention also relates to kits for carrying out the method.
LanguageEnglish
Patent numberWO2007/051256
IPCG01N 33/68
Priority date4/11/05
Publication statusPublished - 10 May 2007

Fingerprint

Monitoring
Proteins
Peptide Hydrolases
Peptides
Fluorescence
Patents and inventions
Proteome
Fluorescent Dyes
Recombinant Proteins
Rate constants
Coloring Agents
Fusion reactions
Sampling
Plasmas
Kinetics

Bibliographical note

from PCT/AU2006/001649

Cite this

Karuso, P., Choi, H., Crawford, A. S., & Scott, G. (2007). IPC No. G01N 33/68. Method for monitoring protein digestion. (Patent No. WO2007/051256).
Karuso, Peter (Inventor) ; Choi, Hung-yoon (Inventor) ; Crawford, Angela S. (Inventor) ; Scott, Graham (Inventor). / Method for monitoring protein digestion. IPC No.: G01N 33/68. Patent No.: WO2007/051256.
@misc{b9da2b16c011449da49836ee24ca878a,
title = "Method for monitoring protein digestion",
abstract = "Methods of monitoring protein or peptide digestion by a proteolytic enzyme, comprising contacting a protein or peptide with a proteolytic enzyme in the presence of a fluorescent dye such as epicocconone or a related dye under conditions which allow digestion of the protein by the proteolytic enzyme and monitoring the fluorescence of the mixture over time. The protein may be a recombinant protein having a tag such as 6X HIS, 10X HIS, FLAG, CBP, HSV, S- tag or HA; or fusion proteins such as GST or MBP. Further, the protein or peptide may be present in a complex protein/peptide mixture, for example a biological sample such as serum or plasma or an entire proteome. The monitoring can be performed on the reaction mixture in real-time or via sampling. The temporal decrease in fluorescence signifies digestion of the protein or peptide by the proteolytic enzyme and the data can be used to extract kinetic rate constants for th digestion. The invention also relates to kits for carrying out the method.",
author = "Peter Karuso and Hung-yoon Choi and Crawford, {Angela S.} and Graham Scott",
note = "from PCT/AU2006/001649; WO2007/051256; G01N 33/68",
year = "2007",
month = "5",
day = "10",
language = "English",
type = "Patent",

}

Karuso, P, Choi, H, Crawford, AS & Scott, G 2007, Method for monitoring protein digestion, Patent No. WO2007/051256, IPC No. G01N 33/68.

Method for monitoring protein digestion. / Karuso, Peter (Inventor); Choi, Hung-yoon (Inventor); Crawford, Angela S. (Inventor); Scott, Graham (Inventor).

IPC No.: G01N 33/68. Patent No.: WO2007/051256.

Research output: PatentResearch

TY - PAT

T1 - Method for monitoring protein digestion

AU - Karuso, Peter

AU - Choi, Hung-yoon

AU - Crawford, Angela S.

AU - Scott, Graham

N1 - from PCT/AU2006/001649

PY - 2007/5/10

Y1 - 2007/5/10

N2 - Methods of monitoring protein or peptide digestion by a proteolytic enzyme, comprising contacting a protein or peptide with a proteolytic enzyme in the presence of a fluorescent dye such as epicocconone or a related dye under conditions which allow digestion of the protein by the proteolytic enzyme and monitoring the fluorescence of the mixture over time. The protein may be a recombinant protein having a tag such as 6X HIS, 10X HIS, FLAG, CBP, HSV, S- tag or HA; or fusion proteins such as GST or MBP. Further, the protein or peptide may be present in a complex protein/peptide mixture, for example a biological sample such as serum or plasma or an entire proteome. The monitoring can be performed on the reaction mixture in real-time or via sampling. The temporal decrease in fluorescence signifies digestion of the protein or peptide by the proteolytic enzyme and the data can be used to extract kinetic rate constants for th digestion. The invention also relates to kits for carrying out the method.

AB - Methods of monitoring protein or peptide digestion by a proteolytic enzyme, comprising contacting a protein or peptide with a proteolytic enzyme in the presence of a fluorescent dye such as epicocconone or a related dye under conditions which allow digestion of the protein by the proteolytic enzyme and monitoring the fluorescence of the mixture over time. The protein may be a recombinant protein having a tag such as 6X HIS, 10X HIS, FLAG, CBP, HSV, S- tag or HA; or fusion proteins such as GST or MBP. Further, the protein or peptide may be present in a complex protein/peptide mixture, for example a biological sample such as serum or plasma or an entire proteome. The monitoring can be performed on the reaction mixture in real-time or via sampling. The temporal decrease in fluorescence signifies digestion of the protein or peptide by the proteolytic enzyme and the data can be used to extract kinetic rate constants for th digestion. The invention also relates to kits for carrying out the method.

UR - https://patents.google.com/patent/WO2007051256A1/

M3 - Patent

M1 - WO2007/051256

ER -

Karuso P, Choi H, Crawford AS, Scott G, inventors. Method for monitoring protein digestion. G01N 33/68. 2007 May 10.