MVC Architecture in Bioinformatics web applications and its Java implementation

Shoba Ranganathan, Durgaprasad Bollina, Bernett T.K. Lee

Research output: Chapter in Book/Report/Conference proceedingConference proceeding contribution

Abstract

Alternative transcript diversity manifests itself a prime cause of complexity in higher eukaryotes. The Alternative Splicing Graph Server (ASGS) is a web service facilitating the systematic study of alternatively spliced genes of higher eukaryotes by generating splicing graphs for the compact visual representation of transcript diversity from a single gene. Taking a set of transcripts in General Feature Format as input, ASGS identifies distinct reference and variable exons, generates a transcript splicing graph, an exon summary, splicing events classification and a single line graph to facilitate experimental analysis
Original languageEnglish
Title of host publicationiiWAS 2005
Subtitle of host publicationthe Seventh International Conference on Information Integration and Web-based Applications & Services : September 19-21, 2005, Kuala Lumpur, Malaysia
EditorsGabriele Kotsis, David Tanier, Stephane Bressan, Ismail Khalil Ibrahim, Mokhtar, Salimah
PublisherAustrian Computer Society
Pages759-764
Number of pages6
ISBN (Print)3854031963
Publication statusPublished - 2005
EventInternational Conference on Information Integration and Web-based Applications and Services (7th : 2005) - Kuala Lumpur
Duration: 19 Sep 200521 Sep 2005

Conference

ConferenceInternational Conference on Information Integration and Web-based Applications and Services (7th : 2005)
CityKuala Lumpur
Period19/09/0521/09/05

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  • Cite this

    Ranganathan, S., Bollina, D., & Lee, B. T. K. (2005). MVC Architecture in Bioinformatics web applications and its Java implementation. In G. Kotsis, D. Tanier, S. Bressan, I. K. Ibrahim, Mokhtar, & Salimah (Eds.), iiWAS 2005: the Seventh International Conference on Information Integration and Web-based Applications & Services : September 19-21, 2005, Kuala Lumpur, Malaysia (pp. 759-764). Austrian Computer Society.