MVC Architecture in Bioinformatics web applications and its Java implementation

Shoba Ranganathan, Durgaprasad Bollina, Bernett T.K. Lee

    Research output: Chapter in Book/Report/Conference proceedingConference proceeding contributionpeer-review

    Abstract

    Alternative transcript diversity manifests itself a prime cause of complexity in higher eukaryotes. The Alternative Splicing Graph Server (ASGS) is a web service facilitating the systematic study of alternatively spliced genes of higher eukaryotes by generating splicing graphs for the compact visual representation of transcript diversity from a single gene. Taking a set of transcripts in General Feature Format as input, ASGS identifies distinct reference and variable exons, generates a transcript splicing graph, an exon summary, splicing events classification and a single line graph to facilitate experimental analysis
    Original languageEnglish
    Title of host publicationiiWAS 2005
    Subtitle of host publicationthe Seventh International Conference on Information Integration and Web-based Applications & Services : September 19-21, 2005, Kuala Lumpur, Malaysia
    EditorsGabriele Kotsis, David Tanier, Stephane Bressan, Ismail Khalil Ibrahim, Mokhtar, Salimah
    PublisherAustrian Computer Society
    Pages759-764
    Number of pages6
    ISBN (Print)3854031963
    Publication statusPublished - 2005
    EventInternational Conference on Information Integration and Web-based Applications and Services (7th : 2005) - Kuala Lumpur
    Duration: 19 Sept 200521 Sept 2005

    Conference

    ConferenceInternational Conference on Information Integration and Web-based Applications and Services (7th : 2005)
    CityKuala Lumpur
    Period19/09/0521/09/05

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