TY - JOUR
T1 - Semantic-spatial feature-fused cortical surface parcellation
T2 - a scale-unified spatial learning network with boundary contrastive loss
AU - Ye, Hailiang
AU - Liu, Siqi
AU - Li, Ming
AU - Zhu, Houying
AU - Cao, Feilong
PY - 2025/4
Y1 - 2025/4
N2 - The cortical surface parcellation provides prior guidance for studying mental disorders and human cognition. Graph neural networks (GNNs) have gained popularity in this task to preserve its spatial structure. However, previous GNNs struggled to effectively exploit the information contained in the complex spatial structure of the cortical surface and generally encountered an uneven node distribution issue. Meanwhile, labeling boundary nodes was also identified as a widespread problem in this task. Accordingly, this paper develops a scale-unified spatial learning network with a boundary contrastive loss (SSLNet) for cortical surface parcellation. Its core is the scale-unified spatial learning module. It devises neighbor feature extraction and aggregation strategies by fully integrating spatial coordinates and semantic structure to learn effective spatial features of local neighborhoods. More importantly, spatial scale unification is incorporated into this module to mitigate the negative effect on spatial learning caused by node distribution differences among local areas. Additionally, a universal boundary contrastive loss is constructed, enhancing the feature discriminability of boundary nodes by constraining them to be close to the same class nodes and apart from different class nodes in the feature space. It considerably improves boundary performance without increasing parameters or changing the network structure. Experiments regarding public Mindboggle demonstrate that the dice score and accuracy of SSLNet achieve
89.8
%
and
90.89
%
, respectively, surpassing existing methods.
AB - The cortical surface parcellation provides prior guidance for studying mental disorders and human cognition. Graph neural networks (GNNs) have gained popularity in this task to preserve its spatial structure. However, previous GNNs struggled to effectively exploit the information contained in the complex spatial structure of the cortical surface and generally encountered an uneven node distribution issue. Meanwhile, labeling boundary nodes was also identified as a widespread problem in this task. Accordingly, this paper develops a scale-unified spatial learning network with a boundary contrastive loss (SSLNet) for cortical surface parcellation. Its core is the scale-unified spatial learning module. It devises neighbor feature extraction and aggregation strategies by fully integrating spatial coordinates and semantic structure to learn effective spatial features of local neighborhoods. More importantly, spatial scale unification is incorporated into this module to mitigate the negative effect on spatial learning caused by node distribution differences among local areas. Additionally, a universal boundary contrastive loss is constructed, enhancing the feature discriminability of boundary nodes by constraining them to be close to the same class nodes and apart from different class nodes in the feature space. It considerably improves boundary performance without increasing parameters or changing the network structure. Experiments regarding public Mindboggle demonstrate that the dice score and accuracy of SSLNet achieve
89.8
%
and
90.89
%
, respectively, surpassing existing methods.
KW - Boundary contrastive loss
KW - Cortical surface parcellation
KW - Graph neural networks
KW - Spatial feature learning
UR - http://www.scopus.com/inward/record.url?scp=85209225830&partnerID=8YFLogxK
U2 - 10.1007/s11517-024-03242-5
DO - 10.1007/s11517-024-03242-5
M3 - Article
C2 - 39549225
SN - 0140-0118
VL - 63
SP - 987
EP - 1000
JO - Medical & Biological Engineering & Computing
JF - Medical & Biological Engineering & Computing
IS - 4
ER -