TY - JOUR
T1 - Strategic traits of bacteria and archaea vary widely within substrate-use groups
AU - Westoby, Mark
AU - Nielsen, Daniel A.
AU - Gillings, Michae R.
AU - Gumerov, Vadim M.
AU - Madin, Joshua S.
AU - Paulsen, Ian T.
AU - Tetu, Sasha G.
PY - 2021/11
Y1 - 2021/11
N2 - Quantitative traits such as maximum growth rate and cell radial diameter are one facet of ecological strategy variation across bacteria and archaea. Another facet is substrate-use pathways, such as iron reduction or methylotrophy. Here, we ask how these two facets intersect, using a large compilation of data for culturable species and examining seven quantitative traits (genome size, signal transduction protein count, histidine kinase count, growth temperature, temperature-adjusted maximum growth rate, cell radial diameter and 16S rRNA operon copy number). Overall, quantitative trait variation within groups of organisms possessing a particular substrate-use pathway was very broad, outweighing differences between substrate-use groups. Although some substrate-use groups had significantly different means for some quantitative traits, standard deviation of quantitative trait values within each substrate-use pathway mostly averaged between 1.6 and 1.8 times larger than standard deviation across group means. Most likely, this wide variation reflects ecological strategy: for example, fast maximum growth rate is likely to express an early successional or copiotrophic strategy, and maximum growth varies widely within most substrate-use pathways. In general, it appears that these quantitative traits express different and complementary information about ecological strategy, compared with substrate use.
AB - Quantitative traits such as maximum growth rate and cell radial diameter are one facet of ecological strategy variation across bacteria and archaea. Another facet is substrate-use pathways, such as iron reduction or methylotrophy. Here, we ask how these two facets intersect, using a large compilation of data for culturable species and examining seven quantitative traits (genome size, signal transduction protein count, histidine kinase count, growth temperature, temperature-adjusted maximum growth rate, cell radial diameter and 16S rRNA operon copy number). Overall, quantitative trait variation within groups of organisms possessing a particular substrate-use pathway was very broad, outweighing differences between substrate-use groups. Although some substrate-use groups had significantly different means for some quantitative traits, standard deviation of quantitative trait values within each substrate-use pathway mostly averaged between 1.6 and 1.8 times larger than standard deviation across group means. Most likely, this wide variation reflects ecological strategy: for example, fast maximum growth rate is likely to express an early successional or copiotrophic strategy, and maximum growth varies widely within most substrate-use pathways. In general, it appears that these quantitative traits express different and complementary information about ecological strategy, compared with substrate use.
KW - ecological strategies
KW - maximum growth rate
KW - cell diameter
KW - genome size
KW - signal transduction proteins
KW - substrate-use pathways
UR - http://www.scopus.com/inward/record.url?scp=85121034359&partnerID=8YFLogxK
U2 - 10.1093/femsec/fiab142
DO - 10.1093/femsec/fiab142
M3 - Article
C2 - 34665251
AN - SCOPUS:85121034359
SN - 0168-6496
VL - 97
SP - 1
EP - 11
JO - FEMS Microbiology Ecology
JF - FEMS Microbiology Ecology
IS - 11
M1 - fiab142
ER -