TY - JOUR
T1 - Ultraviolet relaxation dynamics in uracil
T2 - Time-resolved photoion yield studies using a laser-based thermal desorption source
AU - Ghafur, Omair
AU - Crane, Stuart W.
AU - Ryszka, Michel
AU - Bockova, Jana
AU - Rebelo, Andre
AU - Saalbach, Lisa
AU - De Camillis, Simone
AU - Greenwood, Jason B.
AU - Eden, Samuel
AU - Townsend, Dave
PY - 2018/7/21
Y1 - 2018/7/21
N2 - Wavelength-dependent measurements of the RNA base
uracil, undertaken with nanosecond ultraviolet laser pulses, have previously
identified a fragment at m/z = 84 (corresponding to the C3H4N2O+ ion) at excitation wavelengths ≤232 nm. This has been
interpreted as a possible signature of a theoretically predicted ultrafast
ring-opening occurring on a neutral excited state potential energy surface. To
further investigate the dynamics of this mechanism, and also the non-adiabatic
dynamics operating more generally in uracil, we have used a newly built
ultra-high vacuum spectrometer incorporating a laser-based thermal desorption
source to perform time-resolved ion-yield measurements at pump wavelengths of
267 nm, 220 nm, and 200 nm. We also report complementary data obtained for the
related species 2-thiouracil following 267 nm excitation. Where direct
comparisons can be made (267 nm), our findings are in good agreement with the
previously reported measurements conducted on these systems using cold
molecular beams, demonstrating that the role of initial internal energy on the
excited state dynamics is negligible. Our 220 nm and 200 nm data also represent
the first reported ultrafast study of uracil at pump wavelengths <250 nm,
revealing extremely rapid (<200 fs) relaxation of the bright S3(1ππ*) state. These measurements do not, however, provide any
evidence for the appearance of the m/z = 84 fragment within the first few hundred picoseconds
following excitation. This key finding indicates that the detection of this specific
species in previous nanosecond work is not directly related to an ultrafast
ring-opening process. An alternative excited state process, operating on a more
extended time scale, remains an open possibility.
AB - Wavelength-dependent measurements of the RNA base
uracil, undertaken with nanosecond ultraviolet laser pulses, have previously
identified a fragment at m/z = 84 (corresponding to the C3H4N2O+ ion) at excitation wavelengths ≤232 nm. This has been
interpreted as a possible signature of a theoretically predicted ultrafast
ring-opening occurring on a neutral excited state potential energy surface. To
further investigate the dynamics of this mechanism, and also the non-adiabatic
dynamics operating more generally in uracil, we have used a newly built
ultra-high vacuum spectrometer incorporating a laser-based thermal desorption
source to perform time-resolved ion-yield measurements at pump wavelengths of
267 nm, 220 nm, and 200 nm. We also report complementary data obtained for the
related species 2-thiouracil following 267 nm excitation. Where direct
comparisons can be made (267 nm), our findings are in good agreement with the
previously reported measurements conducted on these systems using cold
molecular beams, demonstrating that the role of initial internal energy on the
excited state dynamics is negligible. Our 220 nm and 200 nm data also represent
the first reported ultrafast study of uracil at pump wavelengths <250 nm,
revealing extremely rapid (<200 fs) relaxation of the bright S3(1ππ*) state. These measurements do not, however, provide any
evidence for the appearance of the m/z = 84 fragment within the first few hundred picoseconds
following excitation. This key finding indicates that the detection of this specific
species in previous nanosecond work is not directly related to an ultrafast
ring-opening process. An alternative excited state process, operating on a more
extended time scale, remains an open possibility.
UR - http://www.scopus.com/inward/record.url?scp=85050363368&partnerID=8YFLogxK
U2 - 10.1063/1.5034419
DO - 10.1063/1.5034419
M3 - Article
C2 - 30037254
VL - 149
JO - The Journal of Chemical Physics
JF - The Journal of Chemical Physics
SN - 0021-9606
IS - 3
M1 - 034301
ER -