UniMOS: a universal framework for multi-organ segmentation over label-constrained datasets

Machine learning models for medical images can help physicians diagnose and manage diseases. However, due to the fact that medical image annotation requires a great deal of manpower and expertise, as well as the fact that clinical departments perform image annotation based on task orientation, there is the problem of having fewer medical image annotation data with more unlabeled data and having many datasets that annotate only a single organ. In this paper, we present UniMOS, the first universal framework for achieving the utilization of fully and partially labeled images as well as unlabeled images. Specifically, we construct a Multi-Organ Segmentation (MOS) module over fully/partially labeled data as the basenet and designed a new target adaptive loss. Furthermore, we incorporate a semi-supervised training module that combines consistent regularization and pseudo-labeling techniques on unlabeled data, which significantly improves the segmentation of unlabeled data. Experiments show that the framework exhibits excellent performance in several medical image segmentation tasks compared to other advanced methods, and also significantly improves data utilization and reduces annotation cost. Code and models are available at: https://github.com/lw8807001/UniMOS.