XdomView: Protein domain and exon position visualization

Gopalan Vivek; Tin Wee Tan; Shoba Ranganathan

doi:10.1093/bioinformatics/19.1.159

XdomView: Protein domain and exon position visualization

Gopalan Vivek, Tin Wee Tan, Shoba Ranganathan^*

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

8 Citations (Scopus)

Abstract

Summary: The relationship between intron distribution in the eukaryotic gene and protein structural elements is essential for understanding the origin and evolution of genes. XdomView is a web-based viewer mapping protein structural domains and intron positions in eukaryotic homologues to its tertiary structure. The association of sequence signals to 3D structure in XdomView provides a valuable visualization environment for eukaryotic gene organization, gene evolution, protein folding and protein structure classification.

Original language	English
Pages (from-to)	159-160
Number of pages	2
Journal	Bioinformatics
Volume	19
Issue number	1
DOIs	https://doi.org/10.1093/bioinformatics/19.1.159
Publication status	Published - 1 Jan 2003
Externally published	Yes

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10.1093/bioinformatics/19.1.159

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title = "XdomView: Protein domain and exon position visualization",

abstract = "Summary: The relationship between intron distribution in the eukaryotic gene and protein structural elements is essential for understanding the origin and evolution of genes. XdomView is a web-based viewer mapping protein structural domains and intron positions in eukaryotic homologues to its tertiary structure. The association of sequence signals to 3D structure in XdomView provides a valuable visualization environment for eukaryotic gene organization, gene evolution, protein folding and protein structure classification.",

author = "Gopalan Vivek and Tan, {Tin Wee} and Shoba Ranganathan",

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AU - Ranganathan, Shoba

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N2 - Summary: The relationship between intron distribution in the eukaryotic gene and protein structural elements is essential for understanding the origin and evolution of genes. XdomView is a web-based viewer mapping protein structural domains and intron positions in eukaryotic homologues to its tertiary structure. The association of sequence signals to 3D structure in XdomView provides a valuable visualization environment for eukaryotic gene organization, gene evolution, protein folding and protein structure classification.

AB - Summary: The relationship between intron distribution in the eukaryotic gene and protein structural elements is essential for understanding the origin and evolution of genes. XdomView is a web-based viewer mapping protein structural domains and intron positions in eukaryotic homologues to its tertiary structure. The association of sequence signals to 3D structure in XdomView provides a valuable visualization environment for eukaryotic gene organization, gene evolution, protein folding and protein structure classification.

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XdomView: Protein domain and exon position visualization

Abstract

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