XdomView: Protein domain and exon position visualization

Gopalan Vivek; Tin Wee Tan; Shoba Ranganathan

doi:10.1093/bioinformatics/19.1.159

XdomView: Protein domain and exon position visualization

Gopalan Vivek, Tin Wee Tan, Shoba Ranganathan^*

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

8 Citations (Scopus)

Abstract

Summary: The relationship between intron distribution in the eukaryotic gene and protein structural elements is essential for understanding the origin and evolution of genes. XdomView is a web-based viewer mapping protein structural domains and intron positions in eukaryotic homologues to its tertiary structure. The association of sequence signals to 3D structure in XdomView provides a valuable visualization environment for eukaryotic gene organization, gene evolution, protein folding and protein structure classification.

Original language	English
Pages (from-to)	159-160
Number of pages	2
Journal	Bioinformatics
Volume	19
Issue number	1
DOIs	https://doi.org/10.1093/bioinformatics/19.1.159
Publication status	Published - 1 Jan 2003
Externally published	Yes

Access to Document

10.1093/bioinformatics/19.1.159

Cite this

@article{edd65dbb7a7546dfbc29b18fb217c0f2,

title = "XdomView: Protein domain and exon position visualization",

abstract = "Summary: The relationship between intron distribution in the eukaryotic gene and protein structural elements is essential for understanding the origin and evolution of genes. XdomView is a web-based viewer mapping protein structural domains and intron positions in eukaryotic homologues to its tertiary structure. The association of sequence signals to 3D structure in XdomView provides a valuable visualization environment for eukaryotic gene organization, gene evolution, protein folding and protein structure classification.",

author = "Gopalan Vivek and Tan, {Tin Wee} and Shoba Ranganathan",

year = "2003",

month = jan,

day = "1",

doi = "10.1093/bioinformatics/19.1.159",

language = "English",

volume = "19",

pages = "159--160",

journal = "Bioinformatics",

issn = "1367-4803",

publisher = "OXFORD UNIV PRESS INC",

number = "1",

}

TY - JOUR

T1 - XdomView

T2 - Protein domain and exon position visualization

AU - Vivek, Gopalan

AU - Tan, Tin Wee

AU - Ranganathan, Shoba

PY - 2003/1/1

Y1 - 2003/1/1

N2 - Summary: The relationship between intron distribution in the eukaryotic gene and protein structural elements is essential for understanding the origin and evolution of genes. XdomView is a web-based viewer mapping protein structural domains and intron positions in eukaryotic homologues to its tertiary structure. The association of sequence signals to 3D structure in XdomView provides a valuable visualization environment for eukaryotic gene organization, gene evolution, protein folding and protein structure classification.

AB - Summary: The relationship between intron distribution in the eukaryotic gene and protein structural elements is essential for understanding the origin and evolution of genes. XdomView is a web-based viewer mapping protein structural domains and intron positions in eukaryotic homologues to its tertiary structure. The association of sequence signals to 3D structure in XdomView provides a valuable visualization environment for eukaryotic gene organization, gene evolution, protein folding and protein structure classification.

UR - http://www.scopus.com/inward/record.url?scp=0037246401&partnerID=8YFLogxK

U2 - 10.1093/bioinformatics/19.1.159

DO - 10.1093/bioinformatics/19.1.159

M3 - Article

C2 - 12499310

AN - SCOPUS:0037246401

SN - 1367-4803

VL - 19

SP - 159

EP - 160

JO - Bioinformatics

JF - Bioinformatics

IS - 1

ER -

XdomView: Protein domain and exon position visualization

Abstract

Access to Document

Other files and links

Fingerprint

Cite this